| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3743 |
|---|
| Symbol | |
|---|
| ID | 9140461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4814375 |
|---|
| End bp | 4815373 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF95 transmembrane |
|---|
| Protein accession | YP_003631754 |
|---|
| Protein GI | 296123976 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.358562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGAG CCACTTTTCT GGCCCAGCGA AAACCGGCCT GGCAAAACTT CGAAAAATCG
CTCAGACGTG TCGAAACCGT CAACCAGCGG CGGCTCTCGT CTGAGGAAGT GCTGGCCTTT
TCGCGTCAAC TGCGCGAAGT CGCCCACGAT CTCGAACTGG TACGGACACG CGACTGGGGC
CTTGATCTCG AAGAATATCT GAACCGGCTG TTGGCTAGGG GGCATGATTA TTTCCACGCC
CCTCGCGCGG GAACGTGGCA TACCATCGGT CAGTTTCTGT TCATGGAGTT TCCCCGCATC
TTCCGCACCT GGTGGGGCTA TCAACTGCTG GCCGCTCTTC TGTTCTTTGG GCCGCTGATC
ATCAGTTGGA TTCTGATTCA GAATGAGCCC CCACTGGCAG CACGTTTCAT GTCGCAGGAA
GCGCTCGATC AGTACGACAT GATGTACTCG AGCGAAGATT CAGCCTCTCT CGACGAGACG
GCCTTCTCGT TTGATTCGTG GAACGATTAC GGCAACGAGC GGGCTTCGAT GGCTGGCTTC
TATGTCCAGC ATAACGTTGG GATTGCCCTG CAATGTTTTG CCCGCGGGAT TCTCCTGGGC
ATTGGGACGA TCTACACGCT GCTTTTTAAT GGCATTTCGA TTGGAGCCAC GGCTGGTTAT
GTCCTTTCGC TCGGTCATGC CGATCGCTTT CTGGGCTTTG TCGTTTCTCA CGGCTCATTT
GAATTAACAG CGATTGCGAT TGCTGGTGGG GCCGGGCTGC TTGTGGGAGA TGCAGCACTT
CATCCGGGCC AGTTGTCACG CTGGTCGGCA CTGCGTTTGC GAGGGAGAGA TGCCGGGCAA
ATGGCCGTAG GAGCAGCCTT CATGCTGGTG GTGGCGGCAC TCATTGAAGC GTTCTGGTCA
CCTGCTCCGA TTCCATCGGA ATACAAATTT CTGGTGGGTG GATTTCTGTG GTTCAGCGTC
GCCATGTACC TGGGCTGGTC AGGCAGGGAG CGCACATGA
|
|---|
| Protein sequence | MKRATFLAQR KPAWQNFEKS LRRVETVNQR RLSSEEVLAF SRQLREVAHD LELVRTRDWG
LDLEEYLNRL LARGHDYFHA PRAGTWHTIG QFLFMEFPRI FRTWWGYQLL AALLFFGPLI
ISWILIQNEP PLAARFMSQE ALDQYDMMYS SEDSASLDET AFSFDSWNDY GNERASMAGF
YVQHNVGIAL QCFARGILLG IGTIYTLLFN GISIGATAGY VLSLGHADRF LGFVVSHGSF
ELTAIAIAGG AGLLVGDAAL HPGQLSRWSA LRLRGRDAGQ MAVGAAFMLV VAALIEAFWS
PAPIPSEYKF LVGGFLWFSV AMYLGWSGRE RT
|
|---|
| |