Gene Plim_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3713 
Symbol 
ID9140431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4774091 
End bp4775836 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631724 
Protein GI296123946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTTC TTTGTGAGCC GCAAGCATGG CACAAGAAGG CGAGCGATCT TCAGAACTTC 
GAATTCCTCG AAACAAGCTT GCGTGTGGCT CGACCTTGCG GCACTTTCTC AATGATTGAC
TCTTCAAAGA TTCTCCGTCC GGACACCGCA ACAATGATCT CTCAGGCCCT GCGACTTGCG
ACGTTTTCGA TCATGCTCTT GCAGTGCGTG ATGGTCTTGG GCGAAGACTC GCTGATTGTG
GAATCGGCTG TGCCGGGGCT GGCACCTTCG TCGCATTATG TAGTGCGTGT GCGACCTGCC
GGGACAGATC GTCCCTGGCA GGAGGCCTTT GTCTGGGAAA CGGTCTGCAA ACAGGTGGAG
CGTAAGGCCG ATGCCTACTT TGATACGCTG GCGGGCTGGT CGCATAGCTA TGTCAATTTT
GAAACGAGTA TCGCTGTCGA AGTTGAAATC TCGCGGGTGG ATGGCCAGCC CATTCGGACG
GCCGCTGTTC ATCCCCAGCG AAAGGCGTCT GCGTGCGTGA TTGTCGATGG GAAGGCCATC
GTCACTTTGG AAAAACCTTG TCTGGTGGCG GTGGATATCA ATGGCCAGAT GGATGAACAG
GACACAGGTA AAGGCTACAA AGGCCCACCG ATTCATACAA TTTCGATCTT TGCGAATCCG
CCATTGCTCA ATAAACCGCA CGCGGATGAG GCGGGCGTTT ATTGTGTCCA GCCGGGGCAG
CAGCCTCCGA CGGGCGGAGA CTGGAAGACG CTCTACTTTC TGCCTGGTGT TCATGATATC
GGCCCAGGCT ATCAACTCCG TGCGCATTGC CAGTACTATA TACCGGGTAA TGCGATCGTG
TATGGTACGT TTTCTAATCA AACCTGGGGG GCTGGGCACC ATATACGAAT TTTTGGGATG
GGGACTTTAT CCGGCGCGAG ACTCAAGCAT CCTGAATACG TCTCACCAGA GCTATCTCAG
GCACAGCAGA AACAGTATCG ACCCATTGAA ATCGTAGGGA CGACGGATAC TCAGGTCGAA
GGGATTACAA TTGCTGATTC GGCCACGCAC TCACTGATGC TCATTCATCC CTATAAGAAA
GATCACCCGA ATACAGTTCG CTGGACGAAG ATATTTACGT GGCGGGCGAA TGGAGACGGT
ATTAATCCGT TTGGAAACAC ATTGATCGAA GATTGTTTTA TCAGAACACA GGACGACTCG
CTGTATGTGA GCGGCTTGGG CATACGCCGC ACTGTGCTCT GGAACGATGC CAATGGCTCG
TCCTTTGTGC TCAGCAGTCT TCCGGAGTTA ACAGATCGGC AATTGATCGT CGAGGATTGT
GATGTCATCT ATAGTCGGGC GAAATGGCAT CATTGGAGTG GCGGGCGGGT CTTTAACATG
CGCGGTGAAG GTGGCGGAGC TGCCGGTCGC GGTGTGATCT TTCGGAATAT CCATATCGAA
GATCCCCGGC CAACGTTGCA GCAATTCTTC GTTTGCATGA CGATGCCCGA GCCTTATTCG
CGGCACGGAG AAAGCCGCTC GGCGGGTGAT CTTGCGGGAA TATTGTTTCA GAACATCTCG
ATTGCCGCCC CCAGCGTTCT GGGTGAACCT CAGCTGTTAT GGGGCGCACC CAACGCCCGG
ATTCGGGACT TGCGATTTGA AAACCTGACA GTCTCAGGCC AACCAATCCT CGATGCTTCG
TTCTTTAAGA TCAACGCTGA TGTCGATGGA TTAACTTTTG AAAAGACCAC ACCACTCGTT
CCTTGA
 
Protein sequence
MALLCEPQAW HKKASDLQNF EFLETSLRVA RPCGTFSMID SSKILRPDTA TMISQALRLA 
TFSIMLLQCV MVLGEDSLIV ESAVPGLAPS SHYVVRVRPA GTDRPWQEAF VWETVCKQVE
RKADAYFDTL AGWSHSYVNF ETSIAVEVEI SRVDGQPIRT AAVHPQRKAS ACVIVDGKAI
VTLEKPCLVA VDINGQMDEQ DTGKGYKGPP IHTISIFANP PLLNKPHADE AGVYCVQPGQ
QPPTGGDWKT LYFLPGVHDI GPGYQLRAHC QYYIPGNAIV YGTFSNQTWG AGHHIRIFGM
GTLSGARLKH PEYVSPELSQ AQQKQYRPIE IVGTTDTQVE GITIADSATH SLMLIHPYKK
DHPNTVRWTK IFTWRANGDG INPFGNTLIE DCFIRTQDDS LYVSGLGIRR TVLWNDANGS
SFVLSSLPEL TDRQLIVEDC DVIYSRAKWH HWSGGRVFNM RGEGGGAAGR GVIFRNIHIE
DPRPTLQQFF VCMTMPEPYS RHGESRSAGD LAGILFQNIS IAAPSVLGEP QLLWGAPNAR
IRDLRFENLT VSGQPILDAS FFKINADVDG LTFEKTTPLV P