Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3699 |
Symbol | |
ID | 9140417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4758343 |
End bp | 4759380 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_003631710 |
Protein GI | 296123932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGC CTTCGATTTT CGGTCTCGAT GACAATCCCG CTCTGGTGCT CACCGTCGAA GCTCGTGCTC ACGGCTGGCG AATTGACCAT TATCTCAGCC GCCTGTATCC CAACTTTAGC CGGGTGGCAT TTCAGCGCAC CATCGAGGAG GGCAAAGTCC TCGTCAATGG CTTGCCCGTT AAGATTTCAC GCCGCCTGCG CGTCAACGAC GTGATTGAGT TCTCGCTCCC TGCTGAACCC GATCAGCGCG TTCAGCCCGA AGATATTCCG CTCGATATTC TTTACGACGA CGAATATCTG TGTGTGATCA ACAAAACTGC CAACATGATT GTCCATCCCG GCCGCGGAAA CTATCGCGGC ACGTTAGCGG GTGCTTTGCA GTTTCACTTT GACAGCTTGA GCGATGTGGC CGGCCAGTAC CGTGCGGGGA TTGTCCATCG ACTCGACCGC GATACGAGTG GTGTGCTTGT CGTCGCCAAA GACAACACGG TGCACCAGCA TCTCAGCCGC CAGTTTGAAG AGCGTTCTGT CGAGAAAGAG TATCACGCCA TTGTCTGGGG TGAGATGCAG TTCGACGCCG ATTATGTCGA AACGTATGTG CGGGTCAGCT TCCGCAATCG AGAGCGGATG ATGGTCTGCC CACCGGGCGA TAACGCGAGG CAGGCCGCTA CTTTTTACGA AGTCCAGCAG CGATTTCGCG GCTTTACGTA TGTGAAACTT CAGCCGCAGA CGGGGCGCAC GCATCAGTTG CGCGTCCACA TGCACCACCT GGGTCATCCG ATTATTGCCG ACCGTCTGTA TGAAGGGAAA ACCTGCGTCA AGCTGTCGGA CATACTTCCG GAAACTCCTG AAGAAGCCGA TGAAACCTTG ATCGACCGAC AAGCCCTGCA TGCCCGCCGC CTGGCCTTCA ATCATCCGGT GACCAAAAAG CGTATGGTCT TCGAAGCCCC CTTACCGGCC GACTTCCAGA AGACTCTCGA CACACTCAAA ACCCACGCGA TCAAGCCCAA AAAATCACCC TCGTCGAAGC TTCGCTAA
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Protein sequence | MNEPSIFGLD DNPALVLTVE ARAHGWRIDH YLSRLYPNFS RVAFQRTIEE GKVLVNGLPV KISRRLRVND VIEFSLPAEP DQRVQPEDIP LDILYDDEYL CVINKTANMI VHPGRGNYRG TLAGALQFHF DSLSDVAGQY RAGIVHRLDR DTSGVLVVAK DNTVHQHLSR QFEERSVEKE YHAIVWGEMQ FDADYVETYV RVSFRNRERM MVCPPGDNAR QAATFYEVQQ RFRGFTYVKL QPQTGRTHQL RVHMHHLGHP IIADRLYEGK TCVKLSDILP ETPEEADETL IDRQALHARR LAFNHPVTKK RMVFEAPLPA DFQKTLDTLK THAIKPKKSP SSKLR
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