Gene Plim_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3670 
Symbol 
ID9140388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4721290 
End bp4722399 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1573 
Protein accessionYP_003631681 
Protein GI296123903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCTA ACATGTTTCG TCAAGTGTCT CGTCTGTTCC AGGCCACCTG TCTGGCCATC 
GGCCTCCTGA CAGTTTGCTC CACAAATCTG CTGGCTCAGG AATTGAACTG GGCCAACAAA
ATGCTGGAGC GGCAGAACAT CGATTTCGGC ACTGTGGCCC GCGGAGCAGA CACCGTCTAC
CGTCTCAAAA TCCGCAATAT TTACAAAGAA GATGTACAAC TCCTCGGAAC CCGCACCAGT
TGTGGCTGCT CCAAGGCCAA GCTCAGCACC AACCTGCTGA AAAGTGGCGA AGAAGGTTAC
GTCGAAATCG CCATGGATAC CTACAAGTTC ATGCGCGAAA AAACCTCGAA CGTCTTCGTG
ACCTTCTCGA TTGCCAACAT TGGCACAGTC GAAGTTCAAA TCCCACTTCG CGTTTACATC
CGCACCGATG TGGTGCTCAC TCCCGGTGCG ATCAACTTCG GCGGCTTCGA TGTCGGGGCT
GGCAAGGAAT CGACCGTCAA CGTGGCTTAT GCAGGTCGTC CTGATTGGAC AGTTACCGGC
ATCAACTCCT CCAATCCACT CGTTACCGCC ACTGTCGTTG AAACCAGCCG CAGCGGTGGT
GCTGTCAACT ATCAGTTGAT TGCCAAGGTT TCACCCGATG CTCCCGTCGG TGACTTTGGA
GGCATCATCT CGCTCACCAC CAACGATGTC GGCACACCCG CCGTCCCGGT TCCATTCAAT
GGTCGAGTGG AAGCTGAGTT TGTCATCACT CCATCTCTCC TCACACTGGG CAACCTGGTT
CCAGGAACCA CCAAAGCCCT GCAGGTGGTC ATTCGCTCCA AGAAGCCTTT TGCCATCGAA
AAAATTGAGT GCGAAACTGT CGATGGGGCC TTCCAGGTCA AGCTCCCCAC CACCACAGCT
CCAGTCCACG TTCTTCCTAT GACACTCAAA GTGCCCGATC TCGCTGGCCC ACTCAACGAA
ACCTTTACCA TCTCGCTCCC AGGTCGCCCC AATGTGATTC AGTTCAAGGC CACGGGAACA
ATCATCTCCG CCCCGGCCGC ACCTCCCACA AATCCAGCCG CCTCGATTCC TGCACCAGCA
GGCGTTCCCG CCACAACCAG CGGGCTGTAA
 
Protein sequence
MIANMFRQVS RLFQATCLAI GLLTVCSTNL LAQELNWANK MLERQNIDFG TVARGADTVY 
RLKIRNIYKE DVQLLGTRTS CGCSKAKLST NLLKSGEEGY VEIAMDTYKF MREKTSNVFV
TFSIANIGTV EVQIPLRVYI RTDVVLTPGA INFGGFDVGA GKESTVNVAY AGRPDWTVTG
INSSNPLVTA TVVETSRSGG AVNYQLIAKV SPDAPVGDFG GIISLTTNDV GTPAVPVPFN
GRVEAEFVIT PSLLTLGNLV PGTTKALQVV IRSKKPFAIE KIECETVDGA FQVKLPTTTA
PVHVLPMTLK VPDLAGPLNE TFTISLPGRP NVIQFKATGT IISAPAAPPT NPAASIPAPA
GVPATTSGL