| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3656 |
|---|
| Symbol | |
|---|
| ID | 9140374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 4702283 |
|---|
| End bp | 4703392 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1559 |
|---|
| Protein accession | YP_003631667 |
|---|
| Protein GI | 296123889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAGT TGATGTCTTC GAGGAAGTCT GGATTTACGC TGATTGAGTT GCTGGTGGTG
ATTGCGATCA TTGCCATTCT GATTGCGCTA TTGCTGCCAG CAGTGCAGCA GGCGCGAGAA
GCCGCGCGAA GAACTCAATG CCGTAATAAT CTGAAGCAGT TGGGTTTGGC GTTCCACAAC
TATATGGAAA CGCACGGCAC CACGCCGATT CACCAGCATC GAATCGCAGG TGACTATACC
GGCGGGAATG GCCGAGCGGG TGGCAAGTCA TGGTATTGCT TCATCCTGCC GTTTATCGAT
CAGGCTCCGG CATATAATGA GTTGAATTTT TCTTCGGGCG GTGGCTGGTC TGAATTTGCC
GCGGGAACGA CGAACCAGAT GCGGGTATCC CGAATTCAGA TGCCAGCCTT CAAATGCCCG
TCAGAGTCGA TGGTCAATAC GGCGGATGGG ATTCCTGCTG CTAATTTCAG CTATCTGGCG
AATGCTGGTC GCCCAAGAAA CCTGCTGATG CCTGGCCAGC CTTCAACAAG CGGTGGCCCA
CCCCCACCGT CAAAAGGGAT CGTCACAATG TCCCGAATGA ATCCCGGCTG CGGGTTTAGT
GCGAATTGGT CGCAGACAAC GAACAACGTG GTTCGTATTC GTGACGTGAC TGACGGAACT
TCCAACACCG CCATGCTGAG TGAATCACTT GTTGCTTCGA GTAGCTCACA TACTGACCGG
CGCCGCAATC TCTCGTACAC CAACTCCGCA GCCATTGAGC AGTACGATGC CTACATCGAC
AACGTTGTGC GGGATGGACT AGCGAATCCA ATCAACTTCG CCTCCTGGAC AACTTATAAG
GGCCATTCAT GGATGTATAC CGATTCTTGG CAGAAACATG TTTACGCCCA TCTCTTCCCT
CCCAATACAG TCAATATTGC CGCCTACAGC ACGGAGACAT TTCGTTGCCA TGAAGGAGAT
GGCGGGATCA CGGCCTCCAG CGAACATACG GGTGGCGTCC ATGTGACGAT GATGGATGGC
TCGGTACGTT TTGTCTCCAA CAGTGTAGAT CTTGCGACAT GGTGGGCGTT GGGTACCAAG
GGAGAAAACG AGGTTCTCGG TGAATTCTAA
|
|---|
| Protein sequence | MSKLMSSRKS GFTLIELLVV IAIIAILIAL LLPAVQQARE AARRTQCRNN LKQLGLAFHN
YMETHGTTPI HQHRIAGDYT GGNGRAGGKS WYCFILPFID QAPAYNELNF SSGGGWSEFA
AGTTNQMRVS RIQMPAFKCP SESMVNTADG IPAANFSYLA NAGRPRNLLM PGQPSTSGGP
PPPSKGIVTM SRMNPGCGFS ANWSQTTNNV VRIRDVTDGT SNTAMLSESL VASSSSHTDR
RRNLSYTNSA AIEQYDAYID NVVRDGLANP INFASWTTYK GHSWMYTDSW QKHVYAHLFP
PNTVNIAAYS TETFRCHEGD GGITASSEHT GGVHVTMMDG SVRFVSNSVD LATWWALGTK
GENEVLGEF
|
|---|
| |