Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3601 |
Symbol | |
ID | 9140319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4637014 |
End bp | 4637505 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | transcription antitermination factor NusB |
Protein accession | YP_003631613 |
Protein GI | 296123835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.397135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATGT CCCGCCGCCA CAAAGCCCGT GAAGTCGTGC TTCAGATGCT GTATCTGAAG GATCTCAATC CCGATGTGGG CTTCGAGCAG ATTCGTCAGA TGATTCAGGC CGAGTTGCCG GATGAAACGC TCTCTCGCTT TGCCTGGGGG CTCTTTTCCG GGGCGATGGA ATTCCGCCCG GCGCTGGACA AGAAAATCGA AGAAGCAGCG GTCAACTGGT CGCTCAGTCG TATGGCACCC ACAGATCGCA ACGTGCTGAG ATTAGGTGCC TATGAACTTC TGCAGACCGA TACGCCCCAC CGCGTGGTGA TCGATGAAGC TCTCGAACTG GCCAAATCTT TTGGCGGTGC GAATAGCGGC TCGTTTGTGA ACGGCATTCT GGATCGTTTA CTGCCGCCCG AGAAAAGAGC ACGCGCTGCG AAGCCCACCG AAGAAGTGCA TGCCACGACA GAGTCAGAAC AGCCAGCCGA TGGAGAAGAA GCTCCTGCGT GA
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Protein sequence | MSMSRRHKAR EVVLQMLYLK DLNPDVGFEQ IRQMIQAELP DETLSRFAWG LFSGAMEFRP ALDKKIEEAA VNWSLSRMAP TDRNVLRLGA YELLQTDTPH RVVIDEALEL AKSFGGANSG SFVNGILDRL LPPEKRARAA KPTEEVHATT ESEQPADGEE APA
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