Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3518 |
Symbol | |
ID | 9140236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 4545866 |
End bp | 4546828 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_003631530 |
Protein GI | 296123752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTC CCTCGATTGA TGAACTTCTC GATCAGGCCA GGCAACTCGC CCGCCAGAGA GAATTTGCTG CCGCCACGCA AATCTATCAG GCGGTCATTG CTCAGGATCC GTCCAACACT GCGGCTTACG ATGGTTTGGG AACGATCTAC TTCGTGCAAG AATTTTATCA GGAAGCCATC AACTGTTTTC TGGAAGTGGC GGCACTCAAG CCCGTCGATG GTAAGCCGCT CTTCAATGCC GGTGCCATCT ACAATCGCAT GGGTGAATAT GCCAAAGCGG TCGAGATCAT TCGCAAAGGT TTGAATCGCG ATAAACGCTG TGCCGAAGGT TATTACAATC TGGGGATCGC GCATCGCAAG CAGTCACAAT GGCAGATGGC GATTTCTTCC TATCGGGAAG CGATTCGCCT CGACCCAGCC TTTGCTGAGG CTTATCAAAA CCTGGGCAAC GTCTATCTCG AAATGCAGAA CTATCCACTG GCCATTCAGA ACTTTAAAAA GTCGCTGGAA GTCAAGCCGG GCTTTGCCAA AGCCCTCTCG GGTTTAGAAA AAGCAGAAAG TCTGTCGCAG CAACTGAAGA ACAAAATCAG CCCTTTCGGC AGACTGGTCG ATCCGAAGGA AGCCGCACAA GGCAACACTT CCGACAGTTC CGGCGTGATG CGTCAGATGA CCAATGCCGA GCGCCTGCAT GACCGGCAAT CGGTACGAGA GTTAGCCCGG CAGATCGAAG TCAATACGGC CGAGATGCTC GAATACGCAC ACAATGAGTT TTTTCCCGTG TTTCAAACAC TCCATCATCT GGTCGTCCAG GGGAATACCG GGCTGGCTTT GCACCGGGCG ACACAACAAT ATCGGGATGC CGTCAATCGA CTGGCCGAGT ACCGCCGTTT ACAACGCCGG AAACTGCTAG AACTTCAAGC CTACGAAGAA CTCATCCAGA TGCGGAGTGT GAGTGTCGGT TAG
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Protein sequence | MSAPSIDELL DQARQLARQR EFAAATQIYQ AVIAQDPSNT AAYDGLGTIY FVQEFYQEAI NCFLEVAALK PVDGKPLFNA GAIYNRMGEY AKAVEIIRKG LNRDKRCAEG YYNLGIAHRK QSQWQMAISS YREAIRLDPA FAEAYQNLGN VYLEMQNYPL AIQNFKKSLE VKPGFAKALS GLEKAESLSQ QLKNKISPFG RLVDPKEAAQ GNTSDSSGVM RQMTNAERLH DRQSVRELAR QIEVNTAEML EYAHNEFFPV FQTLHHLVVQ GNTGLALHRA TQQYRDAVNR LAEYRRLQRR KLLELQAYEE LIQMRSVSVG
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