Gene Plim_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3439 
Symbol 
ID9140156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4450531 
End bp4451736 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631451 
Protein GI296123673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.829729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGG CACAAGTGAA CGGCCCGCCA TTGCCTCGAA ATCCGCAAGG GCGCAATTCC 
GCTCTCCCTG TGGATCCCCG CTTCAAGCGG AGTCCAGTTG CAGAAACAAG TCCGCGTTCA
ACAGCGATCC CATCGGTCGG TAGCAATGAT CCGTTCTCTG GAGAGTATCA GACACTCCCC
ACCATGGAAC TGAATCTCAA TGAAGTCGGG CAACGAGAAA TTTCGCCAGT TTCCTACCGG
CAGATTCCCG GAAATTCAGA GAGTGGAATT CCTGCACCAC CAGGTAGCTA TGACGAGACG
ACAGCAGACG ACTCCGGATC AATTCTCAAT CCGTTGAGTT CTCCGGCACC AGCCTCATCG
ATGAATGCCG GGCCGTGGGC TCCAGCATCT CCGAATGCCT ACCTGCCCGA AGCTGCTCAA
CCGGTGTGGG ATGCTGACGA ACCCTGGTCA TGGCATATCG TCCCAGAAGG TTTGATGTAT
AAATCGTATA TCGCCGGTGA AAAAGAACCT CGCATGTCGA CGTCGTGGCT ATTCCCCACC
AATGGCGGCC AATCGTACTG GGATTCTGTG CTTGGCGGTC GATTTGGTCT CTTGCGCTAT
GGTACAGCAC GCGGAATCGA TCCCGAAGGT TGGCAATGGG ATGTCGAAGG TGGTGCCTTC
TTGCGAATGC TCCCCGAAAC TGAGCGGGAT GTCATGGCGA CTGACTACCG CATTGGTACA
CCAATTACCT ATCGAGAAGG TCCCTTCCAG TGGAAGTTCG GCTACTACCA TATCAGTAGC
CACCTGGGTG ACGAATTTAT TCTGAAAAAT CCGACTTTTG TTCGTAGGAA CTACAGCCGG
GATTGTCTGG TAACAGGCGT GGGATACTTC CCCGTTCCTG AGTTAAGAAC CTATTTTGAG
GTTGGCTATG GCTTCTACCT GACTGATGGA GCAGGCCCCT GGGAAGTTCA GTTTGGGGCA
GAGTATAACC CGCCTGGTCC TACGGGATTT CGCGGAGCAC CGTTCGCAGC CTGTAACGTC
CATCTCATGG AAGAGAATGA CTGGGGCGGG AGTATTAACA TTCTCATCGG CTGGCAGTGG
CGCGGCGACA CGAGTGACCA CACCTTTAGA GCTGGCTTCC AGTTTTACAA TGGTGCCGAT
AACCAGCTTT CCTTCCTGGG GAATACGACT CAATTGACTG GCCTGGGAAT TCGTTACGAC
TACTGA
 
Protein sequence
MALAQVNGPP LPRNPQGRNS ALPVDPRFKR SPVAETSPRS TAIPSVGSND PFSGEYQTLP 
TMELNLNEVG QREISPVSYR QIPGNSESGI PAPPGSYDET TADDSGSILN PLSSPAPASS
MNAGPWAPAS PNAYLPEAAQ PVWDADEPWS WHIVPEGLMY KSYIAGEKEP RMSTSWLFPT
NGGQSYWDSV LGGRFGLLRY GTARGIDPEG WQWDVEGGAF LRMLPETERD VMATDYRIGT
PITYREGPFQ WKFGYYHISS HLGDEFILKN PTFVRRNYSR DCLVTGVGYF PVPELRTYFE
VGYGFYLTDG AGPWEVQFGA EYNPPGPTGF RGAPFAACNV HLMEENDWGG SINILIGWQW
RGDTSDHTFR AGFQFYNGAD NQLSFLGNTT QLTGLGIRYD Y