Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3421 |
Symbol | |
ID | 9140137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4430181 |
End bp | 4432169 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_003631433 |
Protein GI | 296123655 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGGA TTTGTGGTTG CGTCGAAACC ATTGGTCATG ATCAAGCGGG AATCGCCAGC ACAAAGGCCA AATCCCGTGT CGAATCGATG CTGCGCCAAC TCGCTCATCG CGGCCCGGAT GGTTCCGCGA CTTTCTCGAC GAACTTTGCC AGCCTGGGTC ATGCACGTCT TTCGATCATC GATCTCGCGG GTGGTGCCCA GCCACTCTTT AACGAAGACC GCACACTCGC ACTTGTTGCG AATGGAGAAA TTTACAACCA CCAGGAAATC CGCCAGGAAC TCCTCTCGCG TGGTCATCAC TTCCGCACGG GGAGCGATTG CGAAGTCATT GTCCACCTGT ACGAAGAAGT GGGCACTGCC TGTCTCGATG AACTGCAGGG GATGTTCGCC TTCGCGATTC TCGATACCAG GCAGAAAACA CTCTTTGCTG CCCGCGACCG CTTTGGTCAG AAACCGTTCT ATTACTCGTG GCAGGCTGAA CGATTCTCAT TCGCCTCAGA AGCTTCAGCA CTGCTCCCAG TCGGCGAGGC AGTATCTCAA GAACCCGCTC CCATCGATCC TGTGGCGCTG GATCAATACC TTTACTACCA ATTCGTCCCT GCTCCCCGGA CGTTGTTTGA GAATGTCAAA GCACTCCCTG CCGGTCATGC CCTTAATCTC CAGTTCAGCG AACCGGCAGC CGATACAGCC ACTTCGGAAC TGAGAACCTG GGCGTGGTGG TCGCCTCCTG TCCCGAGGCG TTGTTCTGCG ACGTCATCGA CCGCAGACTT CTGGCTCAAC GATCTTGAAG CAGTCATCGA TGAGGCCGTT CGCTCACATC TGCTGGCTGA TGTCCCTGTG GGCCTCTACT TGAGTGGTGG CATTGATTCT TCACTTCTGG GAGCGTTGGC CTGCAAGCAT ATCCATGGCC GGATGCCGGC CTTCTGCATT TCGTTCCCTG GCTCATCGAT GGATGAACAG GCCGCGGCTC TCTGTGCCGC CCGGCATCTG GGGTGCGATC TGGAAGTGGT TGAGTTTCAC GATGAAGACT TTGTGGAACT CGTCGAAACC AGCGGGCAGC TACTTGATCT TCCCCTGGGA GATGCGGCGT TACTTCCTTT ACTCAAATTG AGCCGCGTCG CCAGCCAGAC AGTCAAGACA GTGCTGACAG GTGATGGTGG TGATGAACTG TTTGGTGGAT ACCGCAAGTA CCGCGAGTCC GCGCAAGTTC CTCAATGGTG GCAGAATCTG CATAACATCT GGGGAGCTGC GCTCCCTGTT GAGCGACTCC TCTCTGTCGA CGGCTCCTTC AGTGTATTCC GTCATTTCGT CCTCTGGAGT GCGCGGAACA TTTTCTCCAG TCGGCGAGCT GATCTTCGCA AGCGAGGTTT CGACCCTCGG CAGCGTGCCA GCCTTTATCG ATCAAGTTTT AAGGCTTTGC TCGGAGAGAC GTTTGAGCTT CCCGAGCGAA GTCGCCATGA GGGCTTGACG TGGCTCGATC GGGCATTGCT CGACGATCAA GGCACGAATC TGGCGGATCG ACTCCTCTTC AAGGGAGATC GCGCGACGAT GGGCTATGGT GTCGAAGCCC GGGCACCATT TCTGGATCAT CACGTGGCCG AATTCGCTGC GACACTTCCG GCGAACTGGA TGATTCGCAG CAAAGAAACC AAGTACGCTT TGCGAGCACT GGCCCGCCGC CATTTGCCTG CCGAGATCAC CGAGCGACGC AAAAAGGGTT TTTCGTTGCC ACTCAAGACG TGGTTTGCCA CATCGCTGGC CGATTGGCTG CATGACAAAC TGCTGGCTCC TCACTCACTT TGGGATGAAC TCTTCGAACC CTCTGCCATT GAGCAGCTTT TGCGCGAGCA TCGCTCAGGC CGCGATAACC ACGCCGACAG ACTCTATAGT CTGCTCGTAC TCAAAAACTG GATGTGCCAG AAGGCGACAT GTGCAGCCAC CGATCAGCAC TCGCCGAGCT TCATGCCCGT CGAAAAACAG GCCGCATAG
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Protein sequence | MCGICGCVET IGHDQAGIAS TKAKSRVESM LRQLAHRGPD GSATFSTNFA SLGHARLSII DLAGGAQPLF NEDRTLALVA NGEIYNHQEI RQELLSRGHH FRTGSDCEVI VHLYEEVGTA CLDELQGMFA FAILDTRQKT LFAARDRFGQ KPFYYSWQAE RFSFASEASA LLPVGEAVSQ EPAPIDPVAL DQYLYYQFVP APRTLFENVK ALPAGHALNL QFSEPAADTA TSELRTWAWW SPPVPRRCSA TSSTADFWLN DLEAVIDEAV RSHLLADVPV GLYLSGGIDS SLLGALACKH IHGRMPAFCI SFPGSSMDEQ AAALCAARHL GCDLEVVEFH DEDFVELVET SGQLLDLPLG DAALLPLLKL SRVASQTVKT VLTGDGGDEL FGGYRKYRES AQVPQWWQNL HNIWGAALPV ERLLSVDGSF SVFRHFVLWS ARNIFSSRRA DLRKRGFDPR QRASLYRSSF KALLGETFEL PERSRHEGLT WLDRALLDDQ GTNLADRLLF KGDRATMGYG VEARAPFLDH HVAEFAATLP ANWMIRSKET KYALRALARR HLPAEITERR KKGFSLPLKT WFATSLADWL HDKLLAPHSL WDELFEPSAI EQLLREHRSG RDNHADRLYS LLVLKNWMCQ KATCAATDQH SPSFMPVEKQ AA
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