Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3385 |
Symbol | |
ID | 9140101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4377762 |
End bp | 4379150 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | protein of unknown function UPF0027 |
Protein accession | YP_003631397 |
Protein GI | 296123619 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.67035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTT CTCAACTGCA TAAAATCGGT GTTCCCGATC ATGCGATCGT CCCTGCCATT CAGACCATTC AGCAGATCAA GGCCAGCGAA CACGGCCGCG AAATCAATGT CAAAACTCTG CTGACCGAAG TCGTGGCCAA TCCCGCAGCT TTTGTCGAAC ACGAGTTCTG TGGCGCTTTG GCCCAACTGC TGATCAGCGA ACCTGTTACC AGCAAGCGCG AAGTTCCTGC CGCTTACAAA ACCTGGGGTG AGGAGATCGA CCCGGCTGCA CATGCCCAGA TGCGGACGGC CTGCTTGCTG CCCATGGCTC ACGGTGCCGC CCTGATGCCA GATGCTCATG TCGGTTACGG GCTGCCCATT GGAGGTGTCC TGGCTCTTGA AAATGCCGTC GCGCCTTATG CCGTGGGTGT GGATATTGCC TGTCGGATGA AGCTTTCCGT ACTGGATGTT CCACCATCGG AATTGGCGAC GAATTTTGAA CGCTTTCGCC ATGCGATTGA AGCTGGTACG CGGTTTGGTG TGGGATCTGT GCACGAAAAG CCGCAGGATC ATGCCGTGCT GGATGCCGAC TGGAACATCA CGCGCATTAC CCGCGAACAT AAAGACAAAG CCCGTCGCCA ACTGGGAACC AGCGGCTCAG GCAATCACTT CGTCGAGTTC GGCGAATTGA CTCTCGCAGC AGCCAGTCCG GAACTGGGCC TGGAGGCTGG AACTTACACC GCTCTGTTGA GCCACAGTGG CAGCCGTGGC CCGGGAGCAG CGGTGTGCGA TACCTACAGC CGGATGGCGC AAGCCCGTTT GCCGCGTGGC TGTGAAGATT TTGGCCGCCT GGCCTGGCTG TCGCTCGATA GTGAAGCTGG CCAGGAGTAC TGGGCTGCTA TGAATCTGAT GGGAGATTTC GCTGCTGCGA ATCACGATGT GATTCATCGT CTGGTGAGCA AAAAGCTTGG TGGACGGATT ATTGCTGGAG TGGAAAACCA CCACAATTTT GCCTGGAAAG AAGTCCATTT TGGTCGCGAG TTGATTGTCC ATCGCAAAGG AGCCACTCCT GCAGGTCAAG GTGTTCTCGG AGTGATTCCC GGCTCCATGG CCGACCCGGC GTTCATCGTG AAAGGGAAGG GGGTCGTTGA AAGTTACGAG TCAGCTTCTC ATGGGGCTGG CCGGGTGATG AGCCGCACCA AAGCCCGCGA TCAATTCAAC TTTTCCAAAG TTCGCAAAGA ACTCGAAGCG AAGGGCGTTC GCGTGATTTC AGCCGGTTCT GATGAAGTGC CCGGCGTTTA CAAGAACATT CTCAGCGTGA TGCAGGCACA GTCTGATCTC GTCGAGATTC TCGCTCGCTT TGATCCCAAA ATTGTGAAAA TGAGCGACGA TGGCAAAGCC GAAGATTGA
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Protein sequence | MNTSQLHKIG VPDHAIVPAI QTIQQIKASE HGREINVKTL LTEVVANPAA FVEHEFCGAL AQLLISEPVT SKREVPAAYK TWGEEIDPAA HAQMRTACLL PMAHGAALMP DAHVGYGLPI GGVLALENAV APYAVGVDIA CRMKLSVLDV PPSELATNFE RFRHAIEAGT RFGVGSVHEK PQDHAVLDAD WNITRITREH KDKARRQLGT SGSGNHFVEF GELTLAAASP ELGLEAGTYT ALLSHSGSRG PGAAVCDTYS RMAQARLPRG CEDFGRLAWL SLDSEAGQEY WAAMNLMGDF AAANHDVIHR LVSKKLGGRI IAGVENHHNF AWKEVHFGRE LIVHRKGATP AGQGVLGVIP GSMADPAFIV KGKGVVESYE SASHGAGRVM SRTKARDQFN FSKVRKELEA KGVRVISAGS DEVPGVYKNI LSVMQAQSDL VEILARFDPK IVKMSDDGKA ED
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