Gene Plim_3181 details

Gene Information

• Locus tag: Plim_3181
• ID: 9139895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4117032
• End bp: 4117814
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 56%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003631194
• Protein GI: 296123416

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.100274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTTC TTGGCAAGAA TGCATTGGTC ACTGGTTCGT CTCGCGGGAT TGGTCGAGGT 
TGTGCGATTG AGTTGGCACG GGCCGGGGCC AATGTGGCGA TCAATTATTT CAGCAATCGG 
GACGAAGCCG AATCGCTTGC TCGGGAGATT GAAGCACTGG GCCGGAAGGC AGTGATCTTT 
CAGGGCGATG TCTCACAGCA GGAGGTGATT GAACGAATGA TCGACGAGAC CGCCCAGGCG 
CTGGGCAGTC TGGATCTGTT TGTCTCGAAT GCGGTCTATA GTGATCGTGA GCCGATGCTT 
AAAGCCAATC TCGATGGGTT CCGTCGCACG ATTGATGTCT GCATGTGGGG CGCGTTCTAT 
GGCGTGCGTG CTGCGGCACT GAAAATGGTC GCTCAAGGGC AAGGCGGAGC AATGGCAGTG 
ATCAGTTCAC CCCACGCCGT CATCGCCATC CCGACAGCCA TGGCCTATAA CATGGCGAAG 
GCGGCGATCG ACCACATGGC CCGCACTGCG GCTATCGAAC TGGCACCCCA TCGCATCCGC 
ATCAATATCA TTCACCCCGG CTGGATTGAT ACACCCGGCG AACGTAAGTT TTTTACCGAA 
GAGCAATTAG CCGAAGGAGC CAGAAAACTC CCCTTTGGTC GGCTGGGACA ACCCGAAGAG 
ATTGGAAAGG CAGTAGCCTT TGCACTCAGT GATGACGCCG CCTATATGAC GGGTAGCACA 
CTCTTGATCG ATGGTGGTGT CAGCCTTCCC TGGTGGTCAA ATCGGGAATC TGGCCAGCAA 
TAG 

 

Protein sequence

MKLLGKNALV TGSSRGIGRG CAIELARAGA NVAINYFSNR DEAESLAREI EALGRKAVIF 
QGDVSQQEVI ERMIDETAQA LGSLDLFVSN AVYSDREPML KANLDGFRRT IDVCMWGAFY 
GVRAAALKMV AQGQGGAMAV ISSPHAVIAI PTAMAYNMAK AAIDHMARTA AIELAPHRIR 
INIIHPGWID TPGERKFFTE EQLAEGARKL PFGRLGQPEE IGKAVAFALS DDAAYMTGST 
LLIDGGVSLP WWSNRESGQQ