Gene Plim_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3105 
Symbol 
ID9139819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4020273 
End bp4021571 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content53% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003631119 
Protein GI296123341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.439358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATG ACCTTGAACC AGCCAGTTCT CAGTTCGCCC AGCCAGTTCC AGGTGATATG 
GCAACTCCTG CTATTCAACC GGTAGGGCCG CCTCTTTCCT TGACGGATTT TCTCGATGAG
GAATCTGCTC CGCCGGTGGT CGATACTTCC TTAGTCAGCA ATGACGAAAG TCTGCCGGCA
TTTGTCCGTT CACGACAGTC ACTTGGCCCT GGTCTTGGCG AAGCCGTTGG CTGGACGGCT
GGTGTCTTCG GCAGTCACCT TCTCTTGAGC ATTGGGCTGG TCTTAGTCAT CTCCATCGTC
TCTGCAATTT ATCTCGTCAG CACAGAGGGT ATTAAAGACC CTAAGCAACT GGAACAACGG
CTCGCCATGG GCTCGATGGG AAATACCATT CTCGTCTGTG GTGAGCAGTG GTTGATGGTC
GGTCTGACCA TCGTGGCTGT CTGGCTGCGC ATGGGGAAAC AAACCACCCG GCAACTCAAC
CTCGATCTGC CGCACCCCTA CCAGCTGTTG ATCGTCACCT GCCTGGTGCT CCCTCTGGGT
GGCATCGCCG ATCTCAGTTA TCGACTCGCT TCGATCCCGT GGGATTTTCT CAAGAATCAA
AGCGACTTAT TTGCCCAACT CGACCAAGTG AATATGGTCG AGCAAATGCA GAAAATGACA
GCTTCGATCC CTTTGCCACT GTTGATTCTG GCAATTTCGG TATCACCTGC CATCAGTGAA
GAGCTGGTTT TCCGAGGCCT GTTAGTCCGT GGTTTACTGG CCCGCTGGGG TGTCTTGTGG
ACAATGCTGA TCTCGTCGTT CCTGTTCGCC TTGATCCATT TTCATCCACT GCATGTCATG
GCTGTCTTTC CAATTGGCAT GGCACTCTTC TGGATCTACT ACACCACGCG CAACTTCTGG
TTGCCCATGT GGCTGCATCT GCTCAACAAC CTCTGCTCGA TCCTGGTGAT GCGCTGGCAG
GGAAGTCTCG AAGAGGTGCT CGAAAACGCC GAGACCATGC AATTGGTAGT ACAGTCTGGC
ATTGCACTGC TGGGAACTTC GATCGCTCTG TGGCTGCTCC ATAAAAACCG AACCCGGTAT
GTGAACACCA CGGGAGAAGA ATGGAATCCT CCCGCAGCTC CCATGTCGTC GCCTCCAGTT
CAACTCGGTT TTCAACGCCA GGTGAATGTC GTGGGAATTC CTGTATTTGT GATTGGTGCA
GCTCTTACCG CTTTGTTGCT CTTCGCTCAG GTCAGTTCGA TGATCGAGCC ACTTGACGAA
ACGAAAGCTG GCATTAGTGA TCCTGCTCTT GCACCATGA
 
Protein sequence
MSDDLEPASS QFAQPVPGDM ATPAIQPVGP PLSLTDFLDE ESAPPVVDTS LVSNDESLPA 
FVRSRQSLGP GLGEAVGWTA GVFGSHLLLS IGLVLVISIV SAIYLVSTEG IKDPKQLEQR
LAMGSMGNTI LVCGEQWLMV GLTIVAVWLR MGKQTTRQLN LDLPHPYQLL IVTCLVLPLG
GIADLSYRLA SIPWDFLKNQ SDLFAQLDQV NMVEQMQKMT ASIPLPLLIL AISVSPAISE
ELVFRGLLVR GLLARWGVLW TMLISSFLFA LIHFHPLHVM AVFPIGMALF WIYYTTRNFW
LPMWLHLLNN LCSILVMRWQ GSLEEVLENA ETMQLVVQSG IALLGTSIAL WLLHKNRTRY
VNTTGEEWNP PAAPMSSPPV QLGFQRQVNV VGIPVFVIGA ALTALLLFAQ VSSMIEPLDE
TKAGISDPAL AP