Gene Plim_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3101 
Symbol 
ID9139814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4014527 
End bp4016977 
Gene Length2451 bp 
Protein Length816 aa 
Translation table11 
GC content54% 
IMG OID 
Productflagellar hook-length control protein 
Protein accessionYP_003631115 
Protein GI296123337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.964976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCC GTGATCCTCG ACGATGGACT GCTCCAGGAT TGGCAGGATT CCTCGCGACA 
CCCGCCAATT CTGCCGAAAG CGACTCGCTC AAGGCCGAGG GTTCACAAAC TTCGTCTTCT
TCCGAATTCA GTGCTAGTCT GCTCCGGCAA TACCTGCTGA ATCAGGGAAC CCTTGCTGAG
ACTCTCACAA GCCAGAAAAG TCTGACCGGC GCGAAAGGTC TAACCAGCGA CAAAAGCGAG
GCCAGCAAGC AATTCGACGG AAGATCCTCA GTGACTGGAA ATTCACAGTC GAGCTTGCGC
AGCCTTGCTG ATGATCATCG CCTCTCTCAG AAGGCACGCT CACGCCATTC GGACGATGCC
GAGCCATCGT TCATGGATCG ACTTATCGAT CGTCGCACGG AGGCAACACA GCGTAACGAC
GAATCGACAG TCCGTTCTTC CACACTCCAG GAACATTTGA GCAGGGATGA ACGCCAGGCT
TTACCGGTAG ATCGCGAACA GGATTCGTCT GATACGGATC GAACAGCACC TGCCTCTTTG
CAGGAGAACT CTGAAACGCA GGTTGATCGA ATAGAGCCAT TTCGACAAAA CCTTGTTGAT
GTCTCTAATG CCGGAGTTGA GGCAAATTTC ACTGAAGAAC ACAGCCTTGC TGAAAAACTG
ACAGTTGAGG CGGCAGAATC GATCTCTGTG ATCGACCACG AGAACCTGAC GCACGCCAAT
TCCAACAGTT CTGACTTTGC TGCGGAAAAT GCCGCTCTAA ACGTCTCTAA CAGCTTCGCG
GGATCCGAAA TTCAGGTTCC ATCGAGCGGA ATCGTTCCAG TCGATGACGA GCTTAACCTC
GTCACACAGG AACCGGATTC TGTGCCCGCA AACGTCGCCC ATCCTGCTGC TGCCAATCAA
TATCACCACA TCGCCTCCCG GCTGGTGAGC ACAAAATCGA CTGATGCAGC CTCGATTCGC
TCACTGCAAT CTTTCCAGCA ACTCCTGGCG CAAGATCCCT CATCGCAGTC AATTTCTGGC
AACACCTCGT CTGCTGTCAC AAGCGATGAG ACGAATTCCG CGACGGCTGG GGAACTGCAA
CCAGCGGTTA ATGATCAATC GTCTCAATCG ACAGCGAACC CTGACGATGT GACGATCGAT
TCTTCGTCAA CAGATCTCAC GTCGAGCGAT ACCACCTCGA TTTCGTTAGC CGGTCTCTCT
GCCGGAGTAT TGCCACCGGC AATGACCACT CACGAACAGC GATCAAATTC TCAAGGTGCA
GGTGACGAAC TGGCAGCAGG ACAGGTGCCA GGGAATCGTC AGGGAGAAGC TGGAGCATTG
ATCCTGAATT CTTCGCAGAC TGACGAAACC TCGCTGGCCA CTTCAAGCTC GATTCCAGTG
AGCGCCAACA CTGATCCACA GATCTCAGCC ACACCCAGTT TGCAGGCTCA GTCCGAATCG
ATCATCAACC AGCGGTCGGT TTCGGGAGAA ACTTCCCGTT CCCAGATTTC CGGGGCTCGC
AATGGCAACC AGTCTTTCAG TCAGCGGCAA ACTTCGTGGA GTGCCGTGGG CGGATTGCCA
CCGTGGAGTT CTTTGCCCGG ACTTGGCGAT GCTTCTACGG GCTCTTCGTT CAGTGCGAGT
CTGAATCTTT CATCCCGCGC CGGGGCATCC CCAGGCACAT TCGCGGCAGC TCTGGCAGGT
TCCCAAAATC CCGCCATGGG CCAGATCGCA GAAGCATCTC CCGCAACGGT TGCTGATGCG
GAAACCACAA TACAAACAGT CGCCAAACAT CCGGGAGCCG GTGGGCCGGC AGCGAATCTG
ATAGCCAACA ATGATTCTCA GACCCGCCAG GCAAGCACAA TCACATCAAA CAGCACACAA
CCACCCTTTG CGCAGAGAGT TGTCGTTGAT GGCATCTTGA ACATGACGGC CAGCCATATT
CTGAACTCGG CACGAACCGA GCAAACGTTT TCGATTGTCC TCACCCCTGA AAGTTACGGC
GAATTGTCGA TCGATGTCCG CCAGAATGAA GAGGGAGTGA TGGTGCGGCT GGAAGCGGCC
ACATCGGCGG GGCATGAGTT ATTGAGCGAG CATCTTTCCG AGCTGCGCGA AATACTCGAC
CAGCGTGGAT TGGATGTTGA TCAGATCTCG CTTGAACGCG TCGAAACTCC CCGAGAAGTC
ATCGCGACCA GCGATCCAGC GAACGATCGA TCATCGAATC GTGAACAACC TGATTCTACG
GGCCAGAATC TCCTGACAGG CCAGGAAGGT TCTTCGAGTT CGGGCAGCGA TCGTCAACCA
GATTCTGGCA CTCCTCGCGA AAATTGGAAC CGACTCGATC CACAGGAAGA ACCTCGCACC
GACCATCTGG CCCGGAACAA TCAGGAAGCC AGATCGACAC AATCTTCCGG ATTTGCTAAT
GAAGGGACTG CGAGACCTGT CCGCTGGGAT CACGTGAATA TCCAGATTTG A
 
Protein sequence
MEIRDPRRWT APGLAGFLAT PANSAESDSL KAEGSQTSSS SEFSASLLRQ YLLNQGTLAE 
TLTSQKSLTG AKGLTSDKSE ASKQFDGRSS VTGNSQSSLR SLADDHRLSQ KARSRHSDDA
EPSFMDRLID RRTEATQRND ESTVRSSTLQ EHLSRDERQA LPVDREQDSS DTDRTAPASL
QENSETQVDR IEPFRQNLVD VSNAGVEANF TEEHSLAEKL TVEAAESISV IDHENLTHAN
SNSSDFAAEN AALNVSNSFA GSEIQVPSSG IVPVDDELNL VTQEPDSVPA NVAHPAAANQ
YHHIASRLVS TKSTDAASIR SLQSFQQLLA QDPSSQSISG NTSSAVTSDE TNSATAGELQ
PAVNDQSSQS TANPDDVTID SSSTDLTSSD TTSISLAGLS AGVLPPAMTT HEQRSNSQGA
GDELAAGQVP GNRQGEAGAL ILNSSQTDET SLATSSSIPV SANTDPQISA TPSLQAQSES
IINQRSVSGE TSRSQISGAR NGNQSFSQRQ TSWSAVGGLP PWSSLPGLGD ASTGSSFSAS
LNLSSRAGAS PGTFAAALAG SQNPAMGQIA EASPATVADA ETTIQTVAKH PGAGGPAANL
IANNDSQTRQ ASTITSNSTQ PPFAQRVVVD GILNMTASHI LNSARTEQTF SIVLTPESYG
ELSIDVRQNE EGVMVRLEAA TSAGHELLSE HLSELREILD QRGLDVDQIS LERVETPREV
IATSDPANDR SSNREQPDST GQNLLTGQEG SSSSGSDRQP DSGTPRENWN RLDPQEEPRT
DHLARNNQEA RSTQSSGFAN EGTARPVRWD HVNIQI