| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3080 |
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| Symbol | |
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| ID | 9139792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3985649 |
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| End bp | 3989926 |
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| Gene Length | 4278 bp |
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| Protein Length | 1425 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003631097 |
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| Protein GI | 296123319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGA CTCCCGACGC CAAGACGAAA CTCTCCAAAA CCATTCGCGC CCTGCGCGAA
CGCCTGCTCA CCGAGCTGAA TGAAGCGGTT GACCGCGAGT ACAAATTTAC GCTCAAAAAT
CCTAAGCTCG ACACCAAAAC GAAGATCAAA CGGCAACGGC TGGAGGACTG GCTCGCCGAG
CAGGTCCGCA CGCAAACAGG CAAAGTCAAA CGGACGAAAG AGGTCTTTCG TTCCGACGCG
GAAAAGCAGG CCGCCTATAC GCTGCTCAAC CGGCTCGTCC TCCTGCGGAT CCTGGAAGCC
GTCGGGTTGC GGAAGCCCAA AGTTGTTACC GGGGGCTGGA ACAGCCAGGG GTACAAGGAC
TTTCGCGAAC TCGCCCAGGC ACTGGTCCAG TCCGATGATG GCGAAGGCTA CCCCTTCCTG
CTGCAGCTCA TCTTTGAAGA CCTCGCCATC GACCTCCCCG GATTATACGG CTCCGCCGGT
GTCGCCGATC TCATTCCGGT TCCGTCGCCC ACGATTCGGG CTGTCGTTGA AGCCCTCGAT
GATGAGGCAC TGGAGACTTG CTGGACTGAC GACATGACGC TCGGCTGGGT CTACCAGTAC
TGGAACGACC CCGAGCGGGA AGCGCTGGAT GCCAAAATCA ACGGCGGCGG CAAAATTGAG
CCACACGAGA TTGCCTCAAA AACGCAGATG TTCACCGAAC GCTACATGGT CGACTGGCTG
CTGCAGAACA GCCTGGGGCC GATGTGGCTC GCCATGTGTC AGAAGCATGG CTGGACTCCC
GGGGTTGTCG CCGATGGGAC GCTCGACCGG CTCGAACAAC GCCGCTCGGA GTGGCGCGCG
AAACGCGACG CCGGCGAAGT CGCGCTCACC GACCTCATGC CACTCGAAAC CGACGCCGAG
CGGCGCTGGG CGTATTATGT TCCCCAGCCG ATTCCGGAAG ATGCGGTCGA TCATGCTCCC
CCGTCCCTCC GTGACGTGAA GATTCTCGAC CCGGCCGTCG GGTCCGGGCA CTTTCTCGTC
GTTGCGTTTG ACCTGCTGTT TGCCCTCTAC AAAGAAGAAG CGAAGCATCG CGGACAACAG
GCGGGGGAGC AGTGGACCGA TCAGGCGATT GTCGAACGCA TTCTCGAACA CAACCTGCAT
GGGATCGATC TCGATCCGCG GGCGGTGCAG ATTGCGGCGG CGGCGCTGTG GTTGAAGGCG
CAGCTCGTCG CTCCGTCGGC CCAGATCAAG CAGCTCAATC TGGTGGCTTC CAACCTGGGG
ATCTCGCGGC TGGCGGACAA CGATCCCTCG CTGGTGGAAC TGCGGCGGGC GATCGAGGCG
GAGACTGGCA TTCCGGGCAA GCTGACGATG CAGATTGTTG ACGCACTCAA GGGGGCCGAT
CATCTGGGGA GTCTGCTTAA GATTGATCAG GCGATTACTG AAGCCATGCA TTCCTTTGAG
AAATCACTCG GGATGAAGGA CAAAGTCGAT CGGGTCCTGT TTGGTCCGGA ACTCGGTTCT
GAGATCGTCA TTCAATCGGG CGGCGTCGAC CGCGCGGCCA CGGAAGCCGG CATCCTCTCC
GCCCTCGAAA ACTTCCTCAG CCGGCATACC AGCAGCGAGG AACTGGGGCT GCGGCTGGCG
GGGGAGCAAC TGGCGGCGGG AGTGCGGTTT GTGCGGCTGG TGAAGGAGGG AGCGTACGAT
CTGGTCGTCG CAAATCCGCC GTATCAGGGA ACGTCCAAGA TGGCGGACGT GAAGTACGTC
GCCACGCACT ACAAGCTGGC CAAGGCGGAC CTGTTCGCGG CGTTCCTGCT GCGGGGCCTG
CAACTGGTCC GCGAGCACGG CGTTTCGGCG ATGCTGACAA TGCGGAACTG GATGTTCATC
AAGCAGTATT CCGACCTGCG GCAGCACTTG CTTCAGACGT ATGACTTGCG GGCACTGGGA
GACTTCGACC GGGGCGCGTT TGAAGAAATC CTCGATGAAG TCGTGGCAGT CGCGGCGGCC
TGCTTCGCGC GGGCACCGCA CCGTAGTGAG AGCGTGGCTC AGTGCCCGAC GCCGCGTGAG
GATCGGTCGC GGGATAACGA ACGGACAAAA CGAAAGCGGG CGGCGACGCT CTGCCAAGTC
GGCCGCCACA CGTTCGACCC CGCCGCCCTG AAAGTCGTCC CCGAATGGCC CCTCGTCTAC
TGGTGGGATA GGGCATTCTT AAAAGCATAC AGCGAAGTTG GCACGGTGGG AGCCAATAGC
CCCGCACGGA AGGGCGTTTG CACTTCGAAT AATGGATGGT TTATCCGCCG GCCATGGGAA
ATCTCGGTAA ACAGAATCCG CCATCCTCGA AGTGTGGACC CGACTTGCCA TTGGGCACCC
TATGTAATGG GGGCTGCTGG TAAAGCTTGG ATCGAACCAG TCTCGTTTGC TCTCGAATGG
TCACGCCATG GACTCATGGT CAAAGTGTTG AACGACTATA TCTATTCAAG CTATTCGAGG
ACCATACAGA ATCAGCATTT GTACTTTCGG AAAGGCGTCG CGTTTACAAC TATTGGCTCA
GCATTCACAG GACGCTCTTT TCGAGTTCCG TCAATCTTTG ACACGACAGG ATGCAGTGTC
TTCGGGGCAG ACATCGCGAA TACGACGGCC TTGTTCAATT CATCGAAGGC GCGATCAGTA
TTGACCAGCT TAAACCCCAC GATTCACTTT ACAAATGGAG ATGTCAATCG CTTACCGCTA
TTTCCGATCG AGAATGCTGA CGACGTCTTC AGTCTTGTCG AGACAGCATT CACGAACCAC
GAATCTCACC GCGAGCCGTC CGTCGAGTTC AAACGGCCGG GGCCGTCGCC GTGGCGGCAG
GCTCAGGAGT GGGCGCAGCT GGCGGTGGAT CGGCCCGAGG GAGCGCCGCT GCCGGAGTAT
ATTGAGGAAC TCGATCCCGA GCCGCCGACC GATCATCTCA GCTTCGCCCT CGGCGTCGCC
CTCGGCCGCT TCGGTGCAGG CGGCGAAGGA ATTCTTGATC CGACCAAAGA CGACCTCTCC
AAAGCACTGC CAGCGGGCAT CCTGTTCCTC GACGGGGCTT TGGGCGATGA CGACCGCCGC
GACTCTCTCG GTCATCACGC CGCCCAGATC ATTCACGACA ACTGGAGCGA ATACGGACCG
CAGATCGACA AGCGGCGTTC GCTGCGGGAC TGGCTCCGCG AAAAGTTCTT CCCCGATGTT
CACAAGGGGA TGTACGAGAA CCGCCCGATT CACTGGCCGC TTTCGTCTGG CAAGAAAACA
TTCGTCGCCT GGGTGACAAT CCACCGCTGG AACGACCAGA CGCTACGGGT GCTGCTGGCC
GATCATCTGG AACCGGCCCT GAAACGGCTC GACGGCGAAA TCACCGACCT CACCGCCGCC
CGTAACAGTG CCGACAGGAA ACAGGCCCGC GGGGCCGAAG ACCGCTACGC CGACGTGAAA
GCCTGGCGCG ACGAACTGGC GGAGTTCATT CACCACGTCC AGGAATGCGC CGAACGGGGC
CCCGAGCCTC CCGATGCGAA GAAGCCGGAA CGGGAAGTCG ACGCCCGTTA CATTCCCGAC
CTCGACGACG GCGTGATGAT CAACAGCGCG GCCCTGTGGC CGCTGCTCGA TCCGCAGTGG
AAAGACCCTA AGAAGTGGTG GAAGGAACTG GTCGCTGCCC AAGGGAAAAA GGACTACGAC
TGGTCGCATC TCGCCATGCG GTACTGGCCG ACCCGTGTGG ATGAAAAGTG TCAAAAAGAC
CCGAGTCTCG GCGTCGCCCA CGGCTGTTTC TGGAAGTATC ACCCCGCGCG AGCCTGGGCC
TGGGAACTGC GTCTGCAGGA CGAAATCGGC CCGGAGTTTG AGATCAAGGA AGCCTCCTAT
CGAGGTGACG GCGGCGACTC TGAACACCGT ATCAATTACC TGCACAAGGA GCCGACCGAA
GCTCTGGCAG CGATTGAAAA GGAAGTCCTG CGTCGCAAAC GGAAGCAGAA GCAACCGCAG
TCGGAACTGA CAATTCTGGA ACCCATATTG TGGTCCATCG TTCCGGACGA GTGCTGGGAA
CTGGAGTTGA GGCTGACCGA AAAACAGCAG GTCGAGTTTC GCTTGCTCGC TCCCGATGAA
CCTGAGTGCC GTGCCAGGTT TGAGCAGGCT CATCCGGATC GAGTGAAGTC CCGCTGCGCC
CTGGTGAGCA AGTTGAGTCC GCCAGATCTG TACGTGGATC TGGAAGACGA GGATGAAGCG
GCGAGTGCCG ACGCCGAAGA TCTCGATACG GAGGATGCCG ACGCGATTGA TGCCAACACA
GGGGAGGTGG AGGCATGA
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| Protein sequence | MTMTPDAKTK LSKTIRALRE RLLTELNEAV DREYKFTLKN PKLDTKTKIK RQRLEDWLAE
QVRTQTGKVK RTKEVFRSDA EKQAAYTLLN RLVLLRILEA VGLRKPKVVT GGWNSQGYKD
FRELAQALVQ SDDGEGYPFL LQLIFEDLAI DLPGLYGSAG VADLIPVPSP TIRAVVEALD
DEALETCWTD DMTLGWVYQY WNDPEREALD AKINGGGKIE PHEIASKTQM FTERYMVDWL
LQNSLGPMWL AMCQKHGWTP GVVADGTLDR LEQRRSEWRA KRDAGEVALT DLMPLETDAE
RRWAYYVPQP IPEDAVDHAP PSLRDVKILD PAVGSGHFLV VAFDLLFALY KEEAKHRGQQ
AGEQWTDQAI VERILEHNLH GIDLDPRAVQ IAAAALWLKA QLVAPSAQIK QLNLVASNLG
ISRLADNDPS LVELRRAIEA ETGIPGKLTM QIVDALKGAD HLGSLLKIDQ AITEAMHSFE
KSLGMKDKVD RVLFGPELGS EIVIQSGGVD RAATEAGILS ALENFLSRHT SSEELGLRLA
GEQLAAGVRF VRLVKEGAYD LVVANPPYQG TSKMADVKYV ATHYKLAKAD LFAAFLLRGL
QLVREHGVSA MLTMRNWMFI KQYSDLRQHL LQTYDLRALG DFDRGAFEEI LDEVVAVAAA
CFARAPHRSE SVAQCPTPRE DRSRDNERTK RKRAATLCQV GRHTFDPAAL KVVPEWPLVY
WWDRAFLKAY SEVGTVGANS PARKGVCTSN NGWFIRRPWE ISVNRIRHPR SVDPTCHWAP
YVMGAAGKAW IEPVSFALEW SRHGLMVKVL NDYIYSSYSR TIQNQHLYFR KGVAFTTIGS
AFTGRSFRVP SIFDTTGCSV FGADIANTTA LFNSSKARSV LTSLNPTIHF TNGDVNRLPL
FPIENADDVF SLVETAFTNH ESHREPSVEF KRPGPSPWRQ AQEWAQLAVD RPEGAPLPEY
IEELDPEPPT DHLSFALGVA LGRFGAGGEG ILDPTKDDLS KALPAGILFL DGALGDDDRR
DSLGHHAAQI IHDNWSEYGP QIDKRRSLRD WLREKFFPDV HKGMYENRPI HWPLSSGKKT
FVAWVTIHRW NDQTLRVLLA DHLEPALKRL DGEITDLTAA RNSADRKQAR GAEDRYADVK
AWRDELAEFI HHVQECAERG PEPPDAKKPE REVDARYIPD LDDGVMINSA ALWPLLDPQW
KDPKKWWKEL VAAQGKKDYD WSHLAMRYWP TRVDEKCQKD PSLGVAHGCF WKYHPARAWA
WELRLQDEIG PEFEIKEASY RGDGGDSEHR INYLHKEPTE ALAAIEKEVL RRKRKQKQPQ
SELTILEPIL WSIVPDECWE LELRLTEKQQ VEFRLLAPDE PECRARFEQA HPDRVKSRCA
LVSKLSPPDL YVDLEDEDEA ASADAEDLDT EDADAIDANT GEVEA
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