Gene Plim_2985 details

Gene Information

• Locus tag: Plim_2985
• ID: 9139697
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 3864172
• End bp: 3867693
• Gene Length: 3522 bp
• Protein Length: 1173 aa
• Translation table: 11
• GC content: 58%
• Product: hypothetical protein
• Protein accession: YP_003631006
• Protein GI: 296123228

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0952598
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCTG CTTCTGTTGC TTCGATTGAT CCCGCCGCCT TCATCGCCCG CTGGGCACCT 
TCTGGTGGTT CCGAGCGGTC GAACTACACG CTCTTTCTCT CCGAACTGTG CGACCTGCTG 
GGCGTCCCGA GGCCCGAACC GGCCCAGGCC GATACCTCCC GCAGCTTCTA TGTCTTCGAG 
CGGGATGTCA CCTTCCACAA CAGCGACGGC ACCACCAGCA CCGGCCGCAT CGATCTCTAC 
AAACGCGGCT GCTTCATCCT CGAAGCCAAG CAAGGGGTCG AGCAGGCCGA TGCCGTCGAA 
ATCCTCTCCT CCACTCCCGC AAAGCGCCGA AAGGGTCACG GCACACGCGG CACCAAGGCC 
TACGACGACA CCATGCTCCG CGCCCGCAGC CAGGCCGAGC AATACGCCAA AGCCCTCCCC 
GCCGATGAAG GCTGGCCGCC GTTCCTCATT GTCGTTGATG TCGGCCATTC GATCGAACTC 
TTCGCCGACT TCACCCGCAG CGGCAAGACC TACCTCCCCT TCCCCGATCC CAAGTCCTAC 
CGCATCCTGC TCAATCAACT GGCGCATGAC GACATTCGCC ACACGCTGAA AACCGTCTGG 
ACCGATCCCG TCTCGCTCGA CCCCTCCCGC CGGGCTGCCA AAGTCACACG CGAACTCGCC 
GATCGTCTCG CCCGGCTCGC CAAATCGCTC GAAGCCTCGA AGTTTGACCC CGGGCGCGTG 
GCGCAGTTTC TCATGCGGTG CCTCTTCACC ATGTTCGCTG AAGATGTCGA TCTCATCCCG 
CGCGAGAGCT TCACCAACCT CCTCAAAAGC CTGCGCGATG ATGTCGCCAA CTTCCCCGAG 
ATGATCCGCT CACTGTGGGT GTCGATGGAC AAGGGGCAGT TCGATCCCGT GCTGCGGAAG 
AAGCTCCGCC GGTTCAATGG GGGTCTCTTC GAGGACTGCG AAGCCCTTCC CCTCACCCGC 
GACCAGCTCG AACTCCTCAT CGAAGCCAGC CAGGCCCAGT GGCGGGATGT CGAACCGGCG 
ATCTTCGGCA CACTCCTCGA ACGGGCACTC GATCCGCGCG AGCGGCACAA GCTCGGTGCG 
CACTACACGC CCCGCGCCTA TGTCGAACGG CTCGTCATGC CCACGATCAT GGAGCCGCTC 
CGCGAGGAAT GGGACACCGT CCGGGCCGCC GCCTTCACCG AGGCGGGTCG CGGCCACCGG 
GAAGCGGCCA TTCAGATTCT CCGCGATTTC CACCGGCAAT TGTGCGAAAC CCGCGTCCTC 
GACCCGGCCT GCGGCAGTGG CAACTTCCTC TATGTCGCCT TGGAACATAT GAAGCGGCTG 
GAGGGGGAAG TCCTCAACAC GCTGCACGAT CTGGGCTATA AACAGCGGGA AATCATCACG 
GTTGATCCCC ACCAGTTCAA AGGGATCGAA GTCAACCCCC GGGCCGCGGC CATCGCCGAC 
CTGGTCCTCT GGATCGGCTA TCTCCAGTGG CACACTCGCA CGCGGAACCT GGACGACATC 
TCCGAGCCGA TCATCCAGAA TTTTCATAAC ATCGAATGCC GCGACGCGGT CCTGGCCTGG 
GATGCGATTG AGGAAGTCCG CGATGAACAC GGCCAACCCG TCACCCGCTG GGATGGCCGC 
ACGATGAAGA AACATCCGGT CACCGGTGAA GACGTCCCCG ACGACACCGC CCGCGTACCG 
GTGGTGAAAT ACATCAACCC TAGAAAAGCC GAATGGCCAA AGGCGGAGTA CATTGTTGGG 
AATCCACCAT TTATCGGAAA TTCGAGGATG CGTCACGCGT TGGGAGATGG ATACGCTGAG 
TGCATCCGCC AGACGTACAA TCGCCTACCT GAGACTTGTG ACTTCGTCAT GTATTGGTGG 
GATCGCGCAG CAGAATTTAC TTCTGACAAT CAGGTGAATC GTTTTGGATT CATTACGACA 
AATAGTATTC GCCAAAAGTT CAGCAGGCGA ATACTGGAGC AATACATCAA CGGTCCTGTC 
GCTGCACTCT CTCTCATTTT CGCGATCCCC GACCACCCTT GGGTGGACTC CTCCGATGGC 
GCAGCGGTCA GAATTGCGAT GACAGTGGCC GCTCCTGGAA CTAAAGTAGG TCGTCTAAAC 
AATGTTGCTT CTGAGTCGAT CGGCGTTGAT GACGTCGCAG AAGTAAATCT TCGAGAGCGG 
ATTGGTCGTA TCCAAACTGA CTTGACAATC GGCGCTAATG TCGCTGGTAC ACTCACTCTC 
AAAGCAACAC AGGGACTAAG TTGCCCCGGA GTTAAATTGC ATGGTGCCGG ATTCATCGTT 
TCTCCTGAAG AGGCGAGGCA TCTTGGTTTA GGTAGCGTGC CGGGTCTAGA GCTTCATATT 
CGACAATATC GTAATGGGCG TGACCTTACT GCTAGTCCAA GAGAGGTCAT GGTAATTGAC 
TTGTTCGGCT TGGGCGTTGA CGAATTGCGG CAGCGGTTTC CAGCTGTTTA TCAGCACGTC 
CACGACCATG TGAAACCTGA ACGCGATCAG AACAATCGTG CAGTTTACCG CGATAGTTGG 
TGGATGTTTG GAGAGCCGCG AGCTGCATTC AGGCCTTCAC TGAAGGGCCT TGCACGATAT 
ATTGCCACGG TAGAAACTGC CAAGCATCGG GTATTTCAGT TTCTTGATGC TTCGATATTG 
CCCGACAACA TGCTCGTAGT GATTGCTCTA AACGAATCGT TGCATTTAGG TGTACTAAGT 
TCCCGTATTC ATATTGTTTG GTCTTTGGCC GCTGGTGGAA CATTAGAAGA TCGACCCCGA 
TACAACAAAT CGCGTTGTTT CGAGCCATTT CCATTTCCCG AAATGCCCAA TCCACGCACG 
CCACGCATCC GCGAACTTGG CGAGCAACTC GACGCTCATC GCAAGCGACA ACAAGCCGCT 
CATCCTGACT TGACGCTCAC CGGCATGTAC AACGTCCTCG AAAAGCTCCG CTCCGGCGAA 
CTGTTGACGG CCAAGGAGAA GGTGATTCAT GAGCAGGGGC TGGTGTCGGT TCTCAAGCAG 
ATTCATGACG ACCTCGACGC CGCCGTCTTC GAAGCCTATG GCTGGCCGGT GACACTCACC 
GACGAAGAGA TCCTCGAACG GCTCGTCGCC CTCAATGCCG AGCGGGCCGA AGAGGAAAAA 
CGCGGGCTCA TCCGCTGGCT CCGCCCCGAG TTCCAAAACC CCTCCGGCGG CCAGGCGATC 
CAGCCCGAAC TCGAACTCGA ACTCGAAACC GAAGCCGAGG ACGAAGAAGA AACCGCCGCA 
GCCACCACGA AGAAAGGCGG CAAAGCCAAA AAGGGAGCTG GCAAAACAGC CCCAGGCGGC 
AAGACCAAAG CCCCCGCAAA GCAGCCCTGG CCCACCAAAC TTTCTGAGCA GGTGCAGGCC 
CTCATTCAGA AACTGCAAAC CGCCGACAGC CCGCTGACTG CCCAGGAACT CGCCAAAGCC 
TTCACCCGCG CGAACGCCGA CACGATCGAC GAACTCCTGG AAACCCTCGT CGCCATCGGC 
AAAGCCAGGC AAGTTGGCGA CGACAAGTTC ACAGCCGTGT AG 

 

Protein sequence

MTAASVASID PAAFIARWAP SGGSERSNYT LFLSELCDLL GVPRPEPAQA DTSRSFYVFE 
RDVTFHNSDG TTSTGRIDLY KRGCFILEAK QGVEQADAVE ILSSTPAKRR KGHGTRGTKA 
YDDTMLRARS QAEQYAKALP ADEGWPPFLI VVDVGHSIEL FADFTRSGKT YLPFPDPKSY 
RILLNQLAHD DIRHTLKTVW TDPVSLDPSR RAAKVTRELA DRLARLAKSL EASKFDPGRV 
AQFLMRCLFT MFAEDVDLIP RESFTNLLKS LRDDVANFPE MIRSLWVSMD KGQFDPVLRK 
KLRRFNGGLF EDCEALPLTR DQLELLIEAS QAQWRDVEPA IFGTLLERAL DPRERHKLGA 
HYTPRAYVER LVMPTIMEPL REEWDTVRAA AFTEAGRGHR EAAIQILRDF HRQLCETRVL 
DPACGSGNFL YVALEHMKRL EGEVLNTLHD LGYKQREIIT VDPHQFKGIE VNPRAAAIAD 
LVLWIGYLQW HTRTRNLDDI SEPIIQNFHN IECRDAVLAW DAIEEVRDEH GQPVTRWDGR 
TMKKHPVTGE DVPDDTARVP VVKYINPRKA EWPKAEYIVG NPPFIGNSRM RHALGDGYAE 
CIRQTYNRLP ETCDFVMYWW DRAAEFTSDN QVNRFGFITT NSIRQKFSRR ILEQYINGPV 
AALSLIFAIP DHPWVDSSDG AAVRIAMTVA APGTKVGRLN NVASESIGVD DVAEVNLRER 
IGRIQTDLTI GANVAGTLTL KATQGLSCPG VKLHGAGFIV SPEEARHLGL GSVPGLELHI 
RQYRNGRDLT ASPREVMVID LFGLGVDELR QRFPAVYQHV HDHVKPERDQ NNRAVYRDSW 
WMFGEPRAAF RPSLKGLARY IATVETAKHR VFQFLDASIL PDNMLVVIAL NESLHLGVLS 
SRIHIVWSLA AGGTLEDRPR YNKSRCFEPF PFPEMPNPRT PRIRELGEQL DAHRKRQQAA 
HPDLTLTGMY NVLEKLRSGE LLTAKEKVIH EQGLVSVLKQ IHDDLDAAVF EAYGWPVTLT 
DEEILERLVA LNAERAEEEK RGLIRWLRPE FQNPSGGQAI QPELELELET EAEDEEETAA 
ATTKKGGKAK KGAGKTAPGG KTKAPAKQPW PTKLSEQVQA LIQKLQTADS PLTAQELAKA 
FTRANADTID ELLETLVAIG KARQVGDDKF TAV