Gene Plim_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2935 
Symbol 
ID9139647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3797846 
End bp3798946 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630956 
Protein GI296123178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.984194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTG AAGCTGGTCT TCGCCGTGGT TTTACGTTGA TTGAATTGCT GGTGGTAATT 
GCCATTATCG CGATCCTGAT TGCGCTCCTC CTGCCCGCTG TTCAGCAGGC TAGGGAAGCG
GCCCGCAGGA CACAGTGCCG CAATAACCTC AAGCAGCTGG GTTTGGCAAT TCACAACTAT
GCCGACGTGT TTGGTTGTAT GCCGTCGAAC CTTCGTCGCG ACTCGCAGTC GTGGACATCC
CGCTCGTGGC TCTGTGCCAT TCTTCCGCAG ATCGATCAGG CAGCGGCGTT CAATTCGCTC
ACTTTTTCGG GGACCGATTT TGACAATCGA TCCGCTGGTG GGCCGAATCT CAACTGGCGC
ATTGTTTCCT CATTGCGAGT CCCGGGCGTG AATTGCCCCA GCAGTCCCCT GCCGACGACT
TACACCGCCA CAGCCAGTAC AGGATCGACC ACAGCCGGTG CGCCGGCCAC GTACCCATTT
CAGATTGCCG ATTACGTGGG CATTTCGGGT GCTTACTTTG TGCCCGGAAC ATCCACAATC
ACTTCGCCCA ATTTCTTTGC GAATGGCTAT AAGAATGATT CGGGGATGAT CACCCAGGTG
GTGGGAGCGA CCGGGACGAC CTGGAGTGGA CGCGGCCCTG TCCGTTTTGC AGATGTGATT
GATGGGACAT CGAATACCGT AATGGCGGGT GAAGTTTCCG ATTTTTTCCG GTCTTCGAAT
GGCAGCCAGT GGGATGTTCG CCCGGGTTTT GAAGCCGCCG GTTATGCTTA CAACAGTTCG
TGTGGCTATG GCGCAACGAC AGGTGTTTTC TCGGGCGGAA TGCTTTCATC AGGCCGCTTC
GTCGGTGCCG GGAACTTTTC GAACGAAGTC ACATTTAACG TCGCCATCCC GATGGCTCCC
ATCAACGATA CGACGAACTC GGGCTGGCAG CGTTGCCTCT CCATTTCCAA TAACGGTGCA
CTCCGTTCGG CCCATACGGG TGGGGCACAT GTCCTGTTGG GTGATGGTGG CGTTCGCTTT
CTGTCTCAGA ACATCGACTT TAATGGCACC TTTATGGCTC TGATGGGCAA GAGCGATTCA
GCCATTGTTG GTGAGTTCTA G
 
Protein sequence
MKSEAGLRRG FTLIELLVVI AIIAILIALL LPAVQQAREA ARRTQCRNNL KQLGLAIHNY 
ADVFGCMPSN LRRDSQSWTS RSWLCAILPQ IDQAAAFNSL TFSGTDFDNR SAGGPNLNWR
IVSSLRVPGV NCPSSPLPTT YTATASTGST TAGAPATYPF QIADYVGISG AYFVPGTSTI
TSPNFFANGY KNDSGMITQV VGATGTTWSG RGPVRFADVI DGTSNTVMAG EVSDFFRSSN
GSQWDVRPGF EAAGYAYNSS CGYGATTGVF SGGMLSSGRF VGAGNFSNEV TFNVAIPMAP
INDTTNSGWQ RCLSISNNGA LRSAHTGGAH VLLGDGGVRF LSQNIDFNGT FMALMGKSDS
AIVGEF