Gene Plim_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2925 
Symbol 
ID9139637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3786175 
End bp3787308 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content56% 
IMG OID 
Productchaperone protein DnaJ 
Protein accessionYP_003630946 
Protein GI296123168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTT CGAAACGCGA CTATTACGAA ATTCTGGGCG TCGAAAAATC CGCGACAGCC 
GAAGAGCTGA AAAAGGCTTA TCGGAAGCTG GCGGCGAAGC ATCACCCGGA TCGCAATCCT
GGGAGTGAAG AGGCGATCTA CGCCTTTAAG GAATGCTCCG AAGCTTTCGA GGTGCTGTAC
GATTCGGATA AGCGCGCCCG CTACGACCGC TATGGTCATG CTGGTGTTCA AGGCGGCAGT
GGTGGCTTCC AGGATGTCGA TGATATCTTC GGGGCCTTTG GCGACTTGTT TGGTGATATG
TTCGGCGGCG GTGGCCGGCG CAGACCTGGT GGAAATCGTG GCCGCCGAGG TTCTGACCTG
CGGTCGAAAC TGGTCATCGA TCTTGTCGAA GCGGCTGTCG GCTGCGCTCG CGAACTCGAG
ATTGAAAAGC ACGAACGCTG CAAAACCTGC AGTGGTTCTG GCGCAGCACC TGGCAGTTCT
CCCGAAAAGT GTGAGTATTG CGGCGGGCGT GGGCAGGTTG TGCAGTCACA GGGCTTCTTC
CGCGTTCAGA CCACTTGTCC TGTATGCCGT GGTGAAGGGA CTGTCGTCCG GCAGAAGTGC
GAGACTTGCC GGGGATCGCG ATTCACACCC ATCAAGGTAA GGCTGGAAGT CAAGGTTCCT
GCCGGTGTCG ATAACGATAT GCAGCTATGC ATTCGCGGCG AGGGCGAGCC GGGCGAAGGT
GGCGGGCCAC CTGGCGATCT TTATGTCGAT ATCGTTGTGC GTAAGCACAA GCTCTTTGAA
CGCATGGGCC GAGATCTGGG ATTCCGCCTG CCTGTCACTT ATGCACAAGC CTGCCTGGGG
ACAGAACTGG AAATCCCGAT CCTCACGGGG AAACACAATC TGGTGGTTCC GGCAGGGACA
CAGCCTGGCG ACGTGATTCG AATTCGAGGC CACGGTATGC CCGATCCGCA TTCAGGTCAG
CGAGGTGATC TGCTGGTCGA AGTGCAGGTG GAAGTCCCCA AAAAGCTCTC CAAGAAACAT
GAAGAGTTGC TGCGGCAAAT GGCCGAACTC GATAGCAAGC AGGTCTCGCC TCATCGCAAA
ACATTCTTTG AAACCATCAA AGATCTCTTT GCAGGTGGCG ACAGCAATTC GTAA
 
Protein sequence
MMTSKRDYYE ILGVEKSATA EELKKAYRKL AAKHHPDRNP GSEEAIYAFK ECSEAFEVLY 
DSDKRARYDR YGHAGVQGGS GGFQDVDDIF GAFGDLFGDM FGGGGRRRPG GNRGRRGSDL
RSKLVIDLVE AAVGCARELE IEKHERCKTC SGSGAAPGSS PEKCEYCGGR GQVVQSQGFF
RVQTTCPVCR GEGTVVRQKC ETCRGSRFTP IKVRLEVKVP AGVDNDMQLC IRGEGEPGEG
GGPPGDLYVD IVVRKHKLFE RMGRDLGFRL PVTYAQACLG TELEIPILTG KHNLVVPAGT
QPGDVIRIRG HGMPDPHSGQ RGDLLVEVQV EVPKKLSKKH EELLRQMAEL DSKQVSPHRK
TFFETIKDLF AGGDSNS