Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2916 |
Symbol | |
ID | 9139628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3773935 |
End bp | 3775023 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | mRNA 3'-end processing factor |
Protein accession | YP_003630937 |
Protein GI | 296123159 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCCAA CACCCCTGCT GACTGTGAAT GATCGAGGTC TGTACTGCGA GGCGGGGGAT TTCTATATCG ATCCATGGCG GGCTGTCCCC AAGGCGATCA TTACCCATAC TCATGGAGAT CATGCGCGGC GGGGAATGGG CTCTTATCTG ACGGCGAACG AAGGGCTGCG TGTCCTGCGC ACACGGATGG GAGAGGATGC TCTCATCGAA ACGGTGGGAT ATGGAACCGA GTTCTCGATG GGACCAGTGA AAGTTTCATT GCATCCTGCC GGTCATATCC TCGGTTCGTC GCAGGTTCGA GTGGAGTACA AAGGAGAAGT GTGGGTGGTC TCGGGTGATT ACAAGGTTTT CCCGGATCGA ACCTGCACGC CGTTTGAACC TGTGCGTTGT CATACGTTCG TCACGGAATC GACCTTCGGC ATGCCCATCT ATCGCTGGCC CGATCCTGCC GTTGTCGCCA GTGAGATCAA CACCTGGTGG CGCGAGAATC AGGCGGCAGG TCGTACCAGC GTGCTCCTGG GCTATGCTCT CGGGAAAGCT CAGCGGCTGA TTTCATTATT GGATCCATCG ATCGGGCCCA TTTATACCCA TGGAGCCGTT GAGAAGCTCA CTGCCGATTA TCGGCAAAGT GGAATTGAGT TACCGCCCAC AGAGCAGGTG GTGGGTCATC CCAAAGGCGT TGAGTGGTCG CGTGGGATTG TCATCGCGCC ACCCTCCGTG CAGGGAACTG TCTGGCTCAG AAAGTTTGGC GATGTGTCGA TGGCTTTTGC TTCGGGCTGG ATGACGATAC GGGGGACACG CCGGCGGCAG GCCATGGATC GTGGTTTCGT CGTGTCGGAT CATGTCGACT GGCCCGAATT GCTGTGGGCG ATTCAAGAAA CAGGTTGTGA GCGGGTGCTG GCGACACATG GATCAGTGGC CATTCTTGTC CGCTGGCTGC GAGAGCAAGG TCTTCAGGCA GATGCTCTGC AGACACAGTT TGCTGGTGAA GAAGACCCTG TTGCCGGTGA AGAAGACCCT GTTGTGCAGG AGCCTGTCCA GGACTCTGAG TCAAAAATTG ATCAGCCGGA TGAACAGGGG GCGGATTAA
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Protein sequence | MAPTPLLTVN DRGLYCEAGD FYIDPWRAVP KAIITHTHGD HARRGMGSYL TANEGLRVLR TRMGEDALIE TVGYGTEFSM GPVKVSLHPA GHILGSSQVR VEYKGEVWVV SGDYKVFPDR TCTPFEPVRC HTFVTESTFG MPIYRWPDPA VVASEINTWW RENQAAGRTS VLLGYALGKA QRLISLLDPS IGPIYTHGAV EKLTADYRQS GIELPPTEQV VGHPKGVEWS RGIVIAPPSV QGTVWLRKFG DVSMAFASGW MTIRGTRRRQ AMDRGFVVSD HVDWPELLWA IQETGCERVL ATHGSVAILV RWLREQGLQA DALQTQFAGE EDPVAGEEDP VVQEPVQDSE SKIDQPDEQG AD
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