| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2887 |
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| Symbol | |
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| ID | 9139599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3740309 |
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| End bp | 3743854 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | PBS lyase HEAT domain protein repeat-containing protein |
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| Protein accession | YP_003630908 |
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| Protein GI | 296123130 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.371101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGACG CTGCACCCAC CTGCCCGAAA TGCAACGAAC CTCTTCAGCC CGGGATGCTC
CGTTGCCGTG CCTGTGGCGA AAGGCTGACC CCTGCGACAC GGCAACCCGT CGCAGCTGCC
GCGGGAATTG GCAGTTCAGT CGCCGGTGTG ACAAACGCAC CCGTAGCGAC ACAACCTTTG
AATTCTGCAT CGACAGCTCG ACCATCATCG GCTGCTGGTC CGAAGACAGG GACCGTTCTC
AACCTAAACA GCTTGCTCAA GACAGGGGCA GTCCCTGCCG GAACAACTGG CCCTGTCGGT
TCAAGTGGCC CTCTCGGCTC GACTAGCACA ACGGCAACAA ATGCATCTCC TGTGGCCACA
GGAGGCTTTG ATCAGGGACG TACCGCGAAT GGACTTCCGT CTGGTTCTTC AGGATCGAGC
CTGCGTCTGA AGAAGCCGGC TGGTAATACG CCCATTCAAA CGTCACCTGC GGCTGCCACG
CCGCAGGCAA CCGTCACAAA GACTTCTACG CCCGCTTCGA CTTCCTCGAC CCCAGGATCG
ACTGACACCG CCAAGGTCGC TTCGGCCGCC TCCAGCAAGC TTCCATTGCC TCCCACCAGT
GCCAGTTCCC AGTCGGGCAG CATGCGATTG GCTCGGCCCA GTGGCTCCAG CGGTCGCATG
GAAACCTTTG GTAATGACGC CATTCGAGTC TCCTGCGAAT GCGGCGCCAA GTTCCGTACC
AAGAGTGAAA CGGCTGGCAG AAAGGTCAAA TGCCCCAAGT GTGGTTCAGC AGTGGTCGTA
CCCGGTGGTT CGTCGGAAAC GACTGGGCCG GCACTTGTTG AAAAACGAAA GTTTGCCGAT
CTGGCGAAAG AAATTGCCAG TTTGCCACCT CTGGTCACGA CCGAAAATGA GCCCTCGACC
GGCGTGAAAA ACTCCGCAGA AATGCCCGCT GTCGAATCGG GAACCAAAAT TGAAAGTGGT
TCCAAGCCCG GGCAAACGTC ATCGGGTAGC ACGACCAAAA GGAAGAAGTT ATCAAAATCA
CGCCTGACGA AGTTGTTAAA AGCCGTTGAA CCCAAAGAGA GCGCCAGTTC GGAAGATGCC
GAAAAACGCC GACAAGCCGT TTTAGAATTG GGCATGGCCG AAAATGAAGG GCTGTGGGCC
GAATTGGAGA AACTTAAAGG CGATAGCTGG ATTGTCGTTC GTGAGGCTGT CGCTACCGCA
TTAGGTGATC TGGGGCAACC GGAAGCGACG CCCGCCCTGA TTGAAATGCT CGACGATGAA
GTTCCCGAGG TCAGGCGCAA TGCGATTGCC TCTGTGGGAA AACTGCGCGA TGCCAGAGCC
TGTCGAGCGA TGATTGTGAT GGCTTTGCAG GAGCCTCACT TCCGCTTTGC CTCACTCGAC
TCCATCACCA AAATGGGGAA TGCGGCCACT GCGTCGTTGC AACAGATTCT GCAGGAGAAA
GACCCGGGCT ATGCTCTCGA AGCCGCCGTT GTAGCTGGGC GGACACGCGA TGCGAAGCTG
ATTGAACCAT TACTGAAACT GCTTGGAAAT TCGTTTGCGA TTGTTCGTGG TCAGGCTGCG
GAAAGCCTTG GTCAGATTGG CGATAAGAAG GCCACGGGGC CACTTTGTAA ACTTCTGGAA
GATCCTGAAC AGGGTGTGCG AGTCGCAGCA GCCGGTGCCT TGGCCAGGCT GTCTGATCCA
CGCTCAGTTC CCAGTTTGCT CAAGGGATTA TCACAGGATG ATGCCGATGT TCTGGAACGC
GTGATTACCG CCCTGGGAGA GATCGGTGAT GCCCAGGCGG CTCCTCATCT ATTGCCACTG
ATTGATCATC TTCAAGCGGA AATCCGCGGA GCTGCCGCCG AGGCACTGGG CAAAATCGGC
GCTTCTGAAT CCGCTTCGCC TTTGACACGT CTACTGCACG ATACCGATGA AGCTGTCCGT
CTGAAGGCGA TTGCTGCTTT CCGTAAGTTT AAAGCAAGCA TCGCGGTCGA TCCTCTGCTG
AACTTGCTGA TGGATCCGAA CGCTCAGATC CGCCTCCGTG CTGTCGATAC ATTAGGTGAG
ATTGCTGACG AATCGGCCGT CGATAACCTG ATCCACACTC TGCACAATGA TGGCACGATG
GAAGTTCGGC AGATGGCCGC CAAGGCTTTG GGGGCGATTG GCTCTGCCGA TGGAATTGAA
CCTCTCGAAC AGGCATTGGA AGATGAGTTC CCTGTTCGTT GCCGCGCGAT CACCTCTTTA
GGTCAGATTG GCGCATCGGC TTCGTTGCCG GCCCTACTGG CGATGCTCAA AGATTCTGTA
CCGGAAGTGC GCTATCACAC GACACAGGCG TTAGCCGATC TTGGGAATGC GAATGCTCTC
AAACCCCTCG AAGAGCTCCT TTCCGATGAA CACCCCATGG TTCGTCGCGG GGCTGCCAAG
GCTTTGGTCA AGCTGGGAGA TCCTCGGGGG GAATCGCTAC TCGATGAGAA GAAACTCGCC
AGCTTCAAGA AACAACGCCC AGGGTTCAAA TTCAATTTCT CATCACTGGA GCCGACGGCG
TTCATCGAAG CGATCAAAGC GGCACCACCA GCAGTGGCGA TTGGTGCCAT TGCGGTTCCG
GCACTGCTGC TGATTGGCTT TGCCGCTATG AGCCTGGGTC TGCTGAGTGG CGGAGGTTCC
AGCGTGGTGG TACGCGGCCG ACCGGCTTCG CTGAACTTCA CTCTCGACGG GAAATCTGTC
GTTATCGGAT TCAATAAAGG TGTGGTTGAG GTCTGGCCAG CAACGGGTGG ATCACCTTCA
TCGAAATCGG TCTACGGGAA TTATGCCTCC AATCTGCTGG CGACTGGCGT GGAAGGGACT
TTCTTAAGTG TGGCGGACAA ACAGATTTCA ATGCTCGCCG GCGGCAAAGT GACCCCCATG
GCCGGTCTGC CTTCGATTGC CGCCTACACG ATTCAGTCAC CCGACGGAAA GCATGCGGCT
GCCATTGGCT CAGATGGTTC AATCACGTTT CTTGATCTGG AAAATGCCAA ACCAATGCAG
GCCATTCAAC TCAATACAAA AGCTGTGACC TGCATGGGCC TTTCGAATGG TGGTCGTGAA
ATTGTCGGTG GAAAGAAAGA CGGCAGCATC ACTATCTGGG AAGCTCAATC TGGTAAGCCC
GTGACTGAAC TCAAACTGGG CACCATTGTC CCGGCTGCCA TCGGATTCAA TTCCGCGGGT
GACAAACTCG TGGTCGCCAA TCTCCGCGGT GGAGTCGGCA TTTATGATAT CAAGACCCGC
AAGCGGCTGA ATGACTTGCC ATTCGAAGGC AAAACAGCAC CAATCTTTGC CGGTGCCAGC
TTTGTGGGAG GTAACGATGA TCTGGTGCTG CTCTCAGCGG GCAGTTCTCT CACCACCTGG
AAGGTATCAA CCAATGAAGT AAAGGCTTCC CCTGCTTACG ATCTTGTGGG CGGCATTGGA
GGTCTTGCCA TCAGCCCGAC GGGCGAACAC ATGGCCTTTA TGGACACGGA ATCGGCCGAT
GTCGTGGTTG TAAGCCTCCC CTCACTCGAA GAAGCAGCCG TCCTGAGTGT CCCGGCTGGT
CGTTAA
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| Protein sequence | MSDAAPTCPK CNEPLQPGML RCRACGERLT PATRQPVAAA AGIGSSVAGV TNAPVATQPL
NSASTARPSS AAGPKTGTVL NLNSLLKTGA VPAGTTGPVG SSGPLGSTST TATNASPVAT
GGFDQGRTAN GLPSGSSGSS LRLKKPAGNT PIQTSPAAAT PQATVTKTST PASTSSTPGS
TDTAKVASAA SSKLPLPPTS ASSQSGSMRL ARPSGSSGRM ETFGNDAIRV SCECGAKFRT
KSETAGRKVK CPKCGSAVVV PGGSSETTGP ALVEKRKFAD LAKEIASLPP LVTTENEPST
GVKNSAEMPA VESGTKIESG SKPGQTSSGS TTKRKKLSKS RLTKLLKAVE PKESASSEDA
EKRRQAVLEL GMAENEGLWA ELEKLKGDSW IVVREAVATA LGDLGQPEAT PALIEMLDDE
VPEVRRNAIA SVGKLRDARA CRAMIVMALQ EPHFRFASLD SITKMGNAAT ASLQQILQEK
DPGYALEAAV VAGRTRDAKL IEPLLKLLGN SFAIVRGQAA ESLGQIGDKK ATGPLCKLLE
DPEQGVRVAA AGALARLSDP RSVPSLLKGL SQDDADVLER VITALGEIGD AQAAPHLLPL
IDHLQAEIRG AAAEALGKIG ASESASPLTR LLHDTDEAVR LKAIAAFRKF KASIAVDPLL
NLLMDPNAQI RLRAVDTLGE IADESAVDNL IHTLHNDGTM EVRQMAAKAL GAIGSADGIE
PLEQALEDEF PVRCRAITSL GQIGASASLP ALLAMLKDSV PEVRYHTTQA LADLGNANAL
KPLEELLSDE HPMVRRGAAK ALVKLGDPRG ESLLDEKKLA SFKKQRPGFK FNFSSLEPTA
FIEAIKAAPP AVAIGAIAVP ALLLIGFAAM SLGLLSGGGS SVVVRGRPAS LNFTLDGKSV
VIGFNKGVVE VWPATGGSPS SKSVYGNYAS NLLATGVEGT FLSVADKQIS MLAGGKVTPM
AGLPSIAAYT IQSPDGKHAA AIGSDGSITF LDLENAKPMQ AIQLNTKAVT CMGLSNGGRE
IVGGKKDGSI TIWEAQSGKP VTELKLGTIV PAAIGFNSAG DKLVVANLRG GVGIYDIKTR
KRLNDLPFEG KTAPIFAGAS FVGGNDDLVL LSAGSSLTTW KVSTNEVKAS PAYDLVGGIG
GLAISPTGEH MAFMDTESAD VVVVSLPSLE EAAVLSVPAG R
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