| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2849 |
|---|
| Symbol | |
|---|
| ID | 9139561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3688564 |
|---|
| End bp | 3691491 |
|---|
| Gene Length | 2928 bp |
|---|
| Protein Length | 975 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | tyrosine protein kinase |
|---|
| Protein accession | YP_003630870 |
|---|
| Protein GI | 296123092 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.272735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCCA GACTGACCGA TCGCAATCTT ATCGCCGGTG TCATGGCGCT TCAGCTCAAT
TCCGTCACCC CCGCCCAATT GATCGCGGCC ATGCAGGCTT GGATCCATCA AAAAGAGCTG
CCGCTTGAAG ACCTGCTCCT CCGGCAGCAG TCCATCTCGG CCGAGACGTG CGACTTCATT
AAATCGATCG TCGCCAAACA CATTGAACTC CATGGCGGAT CCGCGGCCCA GAGTCTTGCT
TCGCTCAGTT CTGTCGATGA TATGGTCGAG TCGGTCAAGG ATCTGGTCGA CCCGGATCTC
CAGGCTTCGA TCAGCCAGCT CGTGAAAACC CGCATGGCCA CTCCCGGAAC TCCTTCGCGG
GAGGCTTCGT CACCAGTTCC CTCGTCCGAT GCCTCCGCCG GGATGCCTTG GGCCAAGCTC
CCCACCATCC TCATCGAATC ACCGCTCGAT AACCAACAGC CGGAGGAATT GCCGGCACGC
GAGCTTGAGG CGCGCGAATC CAGGAGTGGC GTACCACAGA GTGGCGAAGC GGCGAGCAAG
CCCGCCAAGT CGGGCAAACC CCGCTTCCGT ATCCTGAAAC TGCATGCTAA GGGAGGGCTG
GGACAGGTCT CGTTGGCGGA AGATTGCGAG TTTCAACGCG AGGTCGCCTT GAAAGAACTG
CAGCCTCGTT TTCGAGGTGA CCCCAACAGC CGGGCGAGGT TTCTCCTCGA GGGCAAAGTC
ACTGGCTGCC TTGAACATCC CGGCATCGTC CCCGTCTACA GCCTCGGCTC TACCGAAGCC
GGTTCCCCCT TCTACGTCAT GCGTTTCATT CGCGGCGACA GCCTCAAGGA GGCCATCGAC
CGCCTGCACG GTGCCAACTC GCACGCCCTC TCCCCCGATG AGCGGCGGCT GACCCTCAAC
AAACTCCTCC GCCGGCTCAT CGATGTCTGC AACGCGATCG AATACTCGCA CAGCCGGGGT
GTCCTCCATC GCGACTTGAA GCCCGGCAAC ATCATGCTCG GCAAGTACGG CGAAACGCTC
GTCGTCGATT GGGGCATCGC CAAGACGATC GGCAAGAAAG GGACCCACGA ACAGGCCGAG
GAACCCACTG TCACCCCCCT TTCCGGCGAA GGTTCGTCGG CCACCCAGGA TGGCAGCGTC
ATCGGCACTC TGGCCTTCAT GAGTCCCGAA CAGGCTCGCG GTGAAATCGA TGCCCTCGGG
CCGACGTCGG ATGTCTTTTG CCTGGGGGCG ACGCTCTACT CGATTCTCAC TGGCCAGGCC
CCCTATGAAC GGATCGCCAG GGAGGAACTG GTCGAAGCCG TCCGCCAATG CCGCTATGTG
CCTCCCCGCG AACTCGCGCC TCAAGCCCCC CCGGCATTGG AGGCCATCTG CCTCAAGGCG
ATGTCCCCCG TGCAGGCGAA CCGCTATCAA TCTGCACTGG AATTGGCGGA AAACCTTGAA
CTTTTCCTCA ACGACGAACC CGTCGCTGTC TACCGCGAAC CCCTGAGGCA GCGGGCCTTC
CGCTGGATCC GCCGCCATCA AACCCTGGCC ACCACCACAG CCGGCGTGCT CACGGCCACC
CTGGTTGCCA CACTCATTAT CGGAGTCCTC GTCACCCGCC AGAACACCAT CCTTACCGCG
AAGAACAACG AGATCTCGAA ACAGCGCGAC CGCGTCGAAA AAGACCGCAT CATGCTCACC
GACCTGTCGG TGGGGCTGCT CAATGAGGCG GAAGTAACAC TTGCGAAGGT TCCCGACACA
GATGCTTATC GCGCAAAACT CATGACTCAG TCTTTTGAAG CCCTCGCACT TCTGTCAGAG
GCGCATCCCA ATGATCAGCG GATCGCCGAG CTTTACGCTA AGTCGGCTCG CTATTCAGCG
AACCAAATCA TGCGGATTGG CCAACGGAAA GCGGCTATCG AGCGGATGCA GCAGTCGCTT
GACCTTCAAT TGCGGAATTT TCCACGCGCG ACCGACCCAC GTATGGCTCG CATGCTCGTC
TGCGAAACCT ATCGTGATCT CGGCAACTTC AAGAGAGCCG TAGGTCAGCT CCGTGCGGCG
GCACTTGACT ACGATGAGGC CGATCAATGG ATATCACCGC TGATCTTGGC CAACCCCACT
GACCTCTCCC CTCGCAAATG TGCCGCCAAT GTACAATTCG GCAGGATCGG CTTATGGATC
GAACTGGACG ACAATGTCCG CGCGGAGGAC TTCGCCCGCC GGAGTGTCGC CGAGTTTCTG
ACTTTTTGCC AACCACCGGC AGGGGTCTAT ACCGACCGCT CCGTTGCGGC ACTGGCGATG
GCTTGGCACG GTTGGCTCCT CGACGAACTC GGCCGACCGG CTGAAGCCCG CGAAGTCTAC
GCTCAGTCGA TTATCACTGT TAAGTCCTGG ATGAAGATCG ACAAAAGTCA TGCGGCAATC
GCTTATCCCT ACGCCCGACT TCTTCATTGG AATGCCGATG GTTCTGCTCA ATCCGGCACC
GTGACAGACG AGCAGCTTCA ACAACTCGCC GAGGCTTTGG AGCACTACGA ACAACTGAGC
AACGGTAGTC CATCGAGTGT GGGATTCAAG GGTAACCTGG CCAGCGCGTG GAAAACCCGC
GGCAAGATCT ACCGGCTCAA ATCCGAGTTT CCTGAGGCTT TAGCGGCACT CGAGCGATCA
GAGGCCATCC TCCGCTCCGT CCCCGCCGAC AAAGCCTCCG GCAGTACTTA CGACAACCTG
CATAAAATGT GGGTCGAGAG GGCCGAAGTC TATCACGCCA CCAACCGCCC CCAGGAGGCA
ATCGCAGCGC TCAAAGAGGC CACCGCTGCT CTCGCCAAAG AAGCCGCGAT GGAACCCGAA
AGCCTCCGCT CCCCCAAAGT CCGCCAGACG CTGGAAAAGC GTGTGGCGGA GTGGGGCAAA
ATCGCTAGCA ATGACATTGA CCGCAGTGAG ACGAGCCGGG CGAAGTAG
|
|---|
| Protein sequence | MESRLTDRNL IAGVMALQLN SVTPAQLIAA MQAWIHQKEL PLEDLLLRQQ SISAETCDFI
KSIVAKHIEL HGGSAAQSLA SLSSVDDMVE SVKDLVDPDL QASISQLVKT RMATPGTPSR
EASSPVPSSD ASAGMPWAKL PTILIESPLD NQQPEELPAR ELEARESRSG VPQSGEAASK
PAKSGKPRFR ILKLHAKGGL GQVSLAEDCE FQREVALKEL QPRFRGDPNS RARFLLEGKV
TGCLEHPGIV PVYSLGSTEA GSPFYVMRFI RGDSLKEAID RLHGANSHAL SPDERRLTLN
KLLRRLIDVC NAIEYSHSRG VLHRDLKPGN IMLGKYGETL VVDWGIAKTI GKKGTHEQAE
EPTVTPLSGE GSSATQDGSV IGTLAFMSPE QARGEIDALG PTSDVFCLGA TLYSILTGQA
PYERIAREEL VEAVRQCRYV PPRELAPQAP PALEAICLKA MSPVQANRYQ SALELAENLE
LFLNDEPVAV YREPLRQRAF RWIRRHQTLA TTTAGVLTAT LVATLIIGVL VTRQNTILTA
KNNEISKQRD RVEKDRIMLT DLSVGLLNEA EVTLAKVPDT DAYRAKLMTQ SFEALALLSE
AHPNDQRIAE LYAKSARYSA NQIMRIGQRK AAIERMQQSL DLQLRNFPRA TDPRMARMLV
CETYRDLGNF KRAVGQLRAA ALDYDEADQW ISPLILANPT DLSPRKCAAN VQFGRIGLWI
ELDDNVRAED FARRSVAEFL TFCQPPAGVY TDRSVAALAM AWHGWLLDEL GRPAEAREVY
AQSIITVKSW MKIDKSHAAI AYPYARLLHW NADGSAQSGT VTDEQLQQLA EALEHYEQLS
NGSPSSVGFK GNLASAWKTR GKIYRLKSEF PEALAALERS EAILRSVPAD KASGSTYDNL
HKMWVERAEV YHATNRPQEA IAALKEATAA LAKEAAMEPE SLRSPKVRQT LEKRVAEWGK
IASNDIDRSE TSRAK
|
|---|
| |