Gene Plim_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2840 
Symbol 
ID9139552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3676516 
End bp3677562 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630861 
Protein GI296123083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCTG CCTTGAAGGC ACGATCACGT TCGAGTGGTT TCACGCTGAT TGAATTGCTG 
GTGGTGATCT CGATCATTGC GATTCTGATG GCACTGCTGT TGCCTGCGGT ACAGCAGGCA
CGTGAAGCGG CTCGCCGCAC ACAATGCCGG AACAATATCA AACAGCTGGG CATTGCACTC
CACAATTATC ACGACAATCA CGGCACTTTG CCCCCCGGCC TCATCGTCAG GCTGGCAACG
AACAACACTC AGGATCTTCC CAGTCGATTT GCTGCAGTTC TCGATCAGAA TCGTCATCTG
GGGACGAACT GGATGGTTTC CCTGTTGCCT TACATCGATC AGGCACCCCT TTACAATCTG
GTCGATATCA ACACCCCGCT CAGCGTTGCC AGTGGAAACA ATGCCACAGT TCGCAGCACT
ACCATTTCCG GATACTTGTG TCCCTCCGAT GCCTTCAATG GTGCCCCTCT CGAACGATAC
AACACTTTTG ACAACACGGG GGCAGCAACT ACAGCTGGCA GACCCTGGGC TCGCGCAAAT
TATGGTGCCA ATCTCGGTCG CGAAATGTAC GAATGGCAAA TCCAGCATCG AGCCACGCCG
TCACAAAAGA AAGGGGCCAT GGGGTTTGGC TCAGGTTCAA AGTTCAGTGA ATTCACGGAT
GGCACCAGCA ACTCGGCGAT GGTCTGGGAG ATTCGTGTCG GCGTAAATAA TCAGGATCCG
CGAGGAGTCT GGGCTCTGGG CCGCTTTGGT GCGAGTCTCG TTGGCGGTTG CGACGTCGGG
ACATCTGGCC TGGCCGATTG CAGTGGCATC AATGCCCGGG ATGCATTTGC TGACGATGTC
GATGGTTGCA CGAACGCACC GCAAAATGGA ATGGGCTGTG CATTCGACCG GGGCGATGGA
GAAGTGGCAC CCCGCAGCAT GCATACCGGT GGCGTGCATA TGCTGCTGGG GGATGGAAGT
GTCCGGTTCA TCTCTGAGAA TCTCGATTTT ACTGTTCACC GAAATCTCAA CAGTATATCC
GGTGGCGAAC TGACTTCCGA ATTCTAA
 
Protein sequence
MLPALKARSR SSGFTLIELL VVISIIAILM ALLLPAVQQA REAARRTQCR NNIKQLGIAL 
HNYHDNHGTL PPGLIVRLAT NNTQDLPSRF AAVLDQNRHL GTNWMVSLLP YIDQAPLYNL
VDINTPLSVA SGNNATVRST TISGYLCPSD AFNGAPLERY NTFDNTGAAT TAGRPWARAN
YGANLGREMY EWQIQHRATP SQKKGAMGFG SGSKFSEFTD GTSNSAMVWE IRVGVNNQDP
RGVWALGRFG ASLVGGCDVG TSGLADCSGI NARDAFADDV DGCTNAPQNG MGCAFDRGDG
EVAPRSMHTG GVHMLLGDGS VRFISENLDF TVHRNLNSIS GGELTSEF