Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2829 |
Symbol | |
ID | 9139541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3665726 |
End bp | 3666511 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | imidazoleglycerol phosphate synthase, cyclase subunit |
Protein accession | YP_003630850 |
Protein GI | 296123072 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTTATC AGCGAATTAT TCCCTGTCTC GACGTGCATG CAGGACGCGT CGTGAAGGGT GTGAACTTTC TCAATCTGCA GGATGCGGGC GATCCCGTCG AAGTGGCTGC CCGATACGAG CGCGACGGGG CCGATGAATT GGTCTTCCTC GACATCACCG CCAGCCACGA GGAGCGAGGC ATCATCCATG ATGTTGTCCG CCGAACCAGC GAAGTCTGCT TCATGCCTCT GACCGTGGGC GGCGGCATCC GCAATCTCGA CGACATCCGC ACGCTGCTCC AGGCGGGTTG CGACAAGGTC TCGATCAACT CGGCAGCCGT CAAAGACCCC GAATTCGTAC GGGCTGCCGC ACTCAAGTTC GGCAAGCAGT GCATCGTCGT CAACATCGAT CCCCGACGAG TCACGCAGCC CGATGGTTCC GTCAAGTGGG AAGTCCACAT CAATGGCGGC CGCAAACCGA CAGGTCTGGA AGCAGTCTCT TGGGCGAAAG AGGTTGAACG TCTGGGCGCT GGTGAGATTG TCCTCACTTC CATGGACGCC GATGGCACCA AGGACGGCTA CGACTTTGAA ATGACCCGCG CCGTGGCGGA TGCCGTCGAA ATCCCCGTCG TCGCCAGCGG TGGTGCCGGG CATCCCGAGC ACTTAAGGCA GATTCTACAG GAGGGCCACG CCAGTGCCGC CCTGGCAGCC AGTATCTTTC ATTATGGCAC GCACCCCATC GGCGAAACCA AAGAGTACCT GCTCAAGCAT GGTGTGCCCA TCAGGCTGAA TCAGCCCATT CCCTGA
|
Protein sequence | MLYQRIIPCL DVHAGRVVKG VNFLNLQDAG DPVEVAARYE RDGADELVFL DITASHEERG IIHDVVRRTS EVCFMPLTVG GGIRNLDDIR TLLQAGCDKV SINSAAVKDP EFVRAAALKF GKQCIVVNID PRRVTQPDGS VKWEVHINGG RKPTGLEAVS WAKEVERLGA GEIVLTSMDA DGTKDGYDFE MTRAVADAVE IPVVASGGAG HPEHLRQILQ EGHASAALAA SIFHYGTHPI GETKEYLLKH GVPIRLNQPI P
|
| |