Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2789 |
Symbol | |
ID | 9139501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3620724 |
End bp | 3621683 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | protein of unknown function DUF1559 |
Protein accession | YP_003630811 |
Protein GI | 296123033 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.909161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA GGCAACAGGC CGGTTTTACG TTGATTGAAT TGCTGGTGGT CATCGCCATC ATTGCGATTC TCATTGCGCT GCTGCTCCCC GCGGTGCAGC AGGCGCGGGA AGCAGCCCGC AGAACCCAAT GCCGGAATAA TCTGAAGCAA TTGGGGATCG CCATGCACAA CTATCACGAC ACCCACAATA CCTTCCCTTT TGGGAGTATG GCGCAAAGTT TGAATACGGC AGGAGCGGGC GGCCCGGGGG CCATGTCCTG GATGCCCATG ATTCTCCCGT ACATGGATCA GGGGCCACTT TACAACCAGC TCACACCGTG GATGGTCGCC AAGAATTCGG CCAACTGGCC CAGTGCCTTG ATGAATACCA TCATCCCCGG CCTGTCATGC CCTTCGGATC CTAACTCACC CAAGGAGACT TCGGTCCATG GCGTGGAAGC CACTCCAGGA GCTGATCCTC CCGATAATAA TGACGGCTTC TGTGGAAACT ATTTGGTCTG CTCCGGAAAT GAGCAAATTA CCGCTGCCAA TTCGACGGCA CTCAGTGGGA TGTTTTTCTA TCGCTCGCGC ATTCGCATGG CTCAGGTTGT TGATGGAACA TCGAATACGG TCATGGTGAG TGAGATCAAT CTGGTTCCCG AGCAAGCCGG TAATCGCGAT TGGCGCGGCC GCTACTATCG CTCCGACCAC CTGAGCTCAT TCTTCACGAC GGAGTTGCCT CCCAATTCGA CAAATCCAGA CTTCCTGCGC ACCTGCCAGG GTTTACCAGC CAGTCCCACC TATGCTCCTT GTACAGGTTC AACCGATCCT CAATATATTT ATGCCCGCAG TCGGCATACC GGCGGAGTTC ATGCACTGAT GGCAGATGGT TCTGGCAAGT TTGTGTCCTC GAACATCGAC ACCAATGTCT GGCGCGCTGT CGGCTCAAGA GCCGGTGGCG AAACCACCAG CGACTTCTAG
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Protein sequence | MKTRQQAGFT LIELLVVIAI IAILIALLLP AVQQAREAAR RTQCRNNLKQ LGIAMHNYHD THNTFPFGSM AQSLNTAGAG GPGAMSWMPM ILPYMDQGPL YNQLTPWMVA KNSANWPSAL MNTIIPGLSC PSDPNSPKET SVHGVEATPG ADPPDNNDGF CGNYLVCSGN EQITAANSTA LSGMFFYRSR IRMAQVVDGT SNTVMVSEIN LVPEQAGNRD WRGRYYRSDH LSSFFTTELP PNSTNPDFLR TCQGLPASPT YAPCTGSTDP QYIYARSRHT GGVHALMADG SGKFVSSNID TNVWRAVGSR AGGETTSDF
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