Gene Plim_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2789 
Symbol 
ID9139501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3620724 
End bp3621683 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content55% 
IMG OID 
Productprotein of unknown function DUF1559 
Protein accessionYP_003630811 
Protein GI296123033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.909161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA GGCAACAGGC CGGTTTTACG TTGATTGAAT TGCTGGTGGT CATCGCCATC 
ATTGCGATTC TCATTGCGCT GCTGCTCCCC GCGGTGCAGC AGGCGCGGGA AGCAGCCCGC
AGAACCCAAT GCCGGAATAA TCTGAAGCAA TTGGGGATCG CCATGCACAA CTATCACGAC
ACCCACAATA CCTTCCCTTT TGGGAGTATG GCGCAAAGTT TGAATACGGC AGGAGCGGGC
GGCCCGGGGG CCATGTCCTG GATGCCCATG ATTCTCCCGT ACATGGATCA GGGGCCACTT
TACAACCAGC TCACACCGTG GATGGTCGCC AAGAATTCGG CCAACTGGCC CAGTGCCTTG
ATGAATACCA TCATCCCCGG CCTGTCATGC CCTTCGGATC CTAACTCACC CAAGGAGACT
TCGGTCCATG GCGTGGAAGC CACTCCAGGA GCTGATCCTC CCGATAATAA TGACGGCTTC
TGTGGAAACT ATTTGGTCTG CTCCGGAAAT GAGCAAATTA CCGCTGCCAA TTCGACGGCA
CTCAGTGGGA TGTTTTTCTA TCGCTCGCGC ATTCGCATGG CTCAGGTTGT TGATGGAACA
TCGAATACGG TCATGGTGAG TGAGATCAAT CTGGTTCCCG AGCAAGCCGG TAATCGCGAT
TGGCGCGGCC GCTACTATCG CTCCGACCAC CTGAGCTCAT TCTTCACGAC GGAGTTGCCT
CCCAATTCGA CAAATCCAGA CTTCCTGCGC ACCTGCCAGG GTTTACCAGC CAGTCCCACC
TATGCTCCTT GTACAGGTTC AACCGATCCT CAATATATTT ATGCCCGCAG TCGGCATACC
GGCGGAGTTC ATGCACTGAT GGCAGATGGT TCTGGCAAGT TTGTGTCCTC GAACATCGAC
ACCAATGTCT GGCGCGCTGT CGGCTCAAGA GCCGGTGGCG AAACCACCAG CGACTTCTAG
 
Protein sequence
MKTRQQAGFT LIELLVVIAI IAILIALLLP AVQQAREAAR RTQCRNNLKQ LGIAMHNYHD 
THNTFPFGSM AQSLNTAGAG GPGAMSWMPM ILPYMDQGPL YNQLTPWMVA KNSANWPSAL
MNTIIPGLSC PSDPNSPKET SVHGVEATPG ADPPDNNDGF CGNYLVCSGN EQITAANSTA
LSGMFFYRSR IRMAQVVDGT SNTVMVSEIN LVPEQAGNRD WRGRYYRSDH LSSFFTTELP
PNSTNPDFLR TCQGLPASPT YAPCTGSTDP QYIYARSRHT GGVHALMADG SGKFVSSNID
TNVWRAVGSR AGGETTSDF