Gene Plim_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2731 
Symbol 
ID9139443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3540177 
End bp3542099 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content54% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003630753 
Protein GI296122975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGC GCTACTTATT CCTGACGATT TTCACTCTGC ACTTGTCGAC AGCACTGAAT 
TCCACAGCGC TGGCTCAACC GTTGCCACGA GCCACGCCTG AATCGCAGGG GGTGGCCTCG
GCTCAGATTC AGAAATTCAT TGAAGCTGCG GATCAGTCGA TCAACACACT CCACAGCTTC
ATGTTGATCC GGCATGGAAA GGTGGTTGCC GAGTGCTGGT GGCAACCACA GACACCGACC
ACGCCGCATG TGATGCATTC GCTGAGCAAG AGTTTCACCT CGACGGCAAT TGGGTTTGCA
GTGAGCGAAG GGAGGCTCAG TGTGGATGAC CCGGTCATCA AGTTCTTCCC CGATCATCTT
CCCGCTGAAG TTTCGCCCAA TCTTAAGGCC ATGCGGGTCA AGGATCTCCT CACCATGTCC
ACAGGCCATG AGACCGAGCC CAGACTCATC GGTGGGCCTG AGGATTCGGG AATTCGCATG
TTCCTGGCGC ATCCTGTCCC CCATAAGCCG GGAACGCACT TCAAGTACAA CACACCCGCC
ACTTACATGC TCTCGGCAAT CGTGCAGAAG GTCTCGGGTG AAAAGTTGAT CGACTACCTG
ACTCCGCGTT TGTTCAAGCC CCTGGGCATT GAAAACCCGG CCTGGTCGAC CAGTGCTGAA
GGAATCAACT ACGGTGGGTT TGGTCTCATG ATTACGACGG AAGACATCGC CCGTTTTGGC
CTCTTCGCAC TGAATGAAGG GCAATGGAAT GGCCAGCAAC TTCTTCCGGC AGCGTGGATT
CGCGAAGCCA CTTCGAAGCA TGTTTCGAAT GGCAGCAATC CCCAAAGTGA CTGGGAACAG
GGCTATGGTT ATCAGTTCTG GCGCTGCCGA CACGGAGCCT TCCGAGGTGA TGGCAAAGAT
GGACAGTTTT GCATTGTTTT GCCCGAGCAG GATGCGGTCA TTGCGATCAC AGCCCATACG
AGCAATATGC AGGCGGAGTT AAACGTCGTC TGGGATCAAC TACTGGCTGC GTTTCATGAA
GCTCCACTGG CAGAAGATCC GGCGGCTCAA GCCCGTCTTA AGGAAGTCTC GTCCAAGCTT
GTCGCTGGTC AACCGAAAGG GACGAGCAAA CTGCTGCTCA GCCAGAAAAT TCAGAGCGAC
ATTTTGAAGA AGGAGATGAA GTACTCGATT TATCTTCCCG CGGGTTATGA AGGCTCGACG
ACTTCGTACC CAGTGCTCTA TCTGCTCCAC GGCTTTGGTG ACGATGAAAC GAGCTGGCAG
TTGAAGGGAA ACATGCAACC CCTCGCGGAT GCCACCATTG CGACCCGCCG GGCACTTCCG
ATGATCATCG TGATGCCCGA TGCGGAGAAA CGTTATTACA TGAACAGCGT GATGGGCGAG
TACATGTACG AAGATTATTT CATTAAGGAA CTGATGCCGC ATATTGAGAA AACCTATCGC
GTCAAAACAG ATCGTGCTGA TCGAGCACTT TCGGGCCTGT CGATGGGTGG TTATGGAAGC
TTGCTTTATG CCCTGCACCA TCCTGAGCTG TTTGCCTCCT GCTATGCCAT GAGTGCCGGT
GTTCGCTCGG ATGAAGAAAT GCGGGCGATT CCGTTTGCCG AGTTCAAAAA GCGGTACGTT
CCTTCCGTCG GCGATCTTGA GGAAGGGGAC GAACGGATCA CTGAGTTTTA CAATCGGAAC
AGTGTGCTGT ACCTGCTGCC AAAAACGCCC GTGGAACAGC TCAAACAGAC ACGCTGGTTC
ATCGATTGTG GGGACGACGA CTTCCTTTAC AAGGGAAATT CCCTGCTGCA CATCACATTC
AGCGACCTGA AAGTTCCGCA TGAGTACCGT GTCCGTGACG GCGGGCACAA CTGGAAGTAC
TGGCAACGCT CACTCCCGGA TGCACTGGAG TTTGTCTCTG AATCGTTTTC GAAGGGGAAA
TAA
 
Protein sequence
MMMRYLFLTI FTLHLSTALN STALAQPLPR ATPESQGVAS AQIQKFIEAA DQSINTLHSF 
MLIRHGKVVA ECWWQPQTPT TPHVMHSLSK SFTSTAIGFA VSEGRLSVDD PVIKFFPDHL
PAEVSPNLKA MRVKDLLTMS TGHETEPRLI GGPEDSGIRM FLAHPVPHKP GTHFKYNTPA
TYMLSAIVQK VSGEKLIDYL TPRLFKPLGI ENPAWSTSAE GINYGGFGLM ITTEDIARFG
LFALNEGQWN GQQLLPAAWI REATSKHVSN GSNPQSDWEQ GYGYQFWRCR HGAFRGDGKD
GQFCIVLPEQ DAVIAITAHT SNMQAELNVV WDQLLAAFHE APLAEDPAAQ ARLKEVSSKL
VAGQPKGTSK LLLSQKIQSD ILKKEMKYSI YLPAGYEGST TSYPVLYLLH GFGDDETSWQ
LKGNMQPLAD ATIATRRALP MIIVMPDAEK RYYMNSVMGE YMYEDYFIKE LMPHIEKTYR
VKTDRADRAL SGLSMGGYGS LLYALHHPEL FASCYAMSAG VRSDEEMRAI PFAEFKKRYV
PSVGDLEEGD ERITEFYNRN SVLYLLPKTP VEQLKQTRWF IDCGDDDFLY KGNSLLHITF
SDLKVPHEYR VRDGGHNWKY WQRSLPDALE FVSESFSKGK