| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2638 |
|---|
| Symbol | |
|---|
| ID | 9139349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3422490 |
|---|
| End bp | 3423374 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003630661 |
|---|
| Protein GI | 296122883 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTGTGC CAGCACCCTT TGCCGACAGT CAGTTTGTTA CCATCAGTGG TCATCGGATG
CACTACCGGG ATGCCGGTGC AGGTCGACCT GTCATCATGC TCCATGGAAA TCCGAACTGG
AGTTATTACT TTCGAAACCT GATTGATTCG CTCAAAGCCA CACATCGTTG TCTTGTCCCG
GATCACATTG GTTGTGGACT CTCTGATAAG CCGGCCGATC GCGACTATCC TTATCGACTG
GAACGTCGCA TTTCGGACAT CACGGAATGG ATCGATGGGC TGCAATTGAC GGAACCGGTG
ACTCTTGTCG TGCATGACTG GGGTGGCATG ATTGGCTGCG GCTGGGCCGT CGAGCATGTG
GAACAGGTTG AGCGTCTGGT GATTCTGAAT ACCGGTGCGT TCCCTCTTCC AAAGCAAAAG
CCTGTGCCGT GGCAATTGCG ACTGGCCCGC ACACCGGGGC TGGGGTCACT TCTGGTTCGC
GGATTCAATG CCTTCAGTGA AGGGGCTGTC CGCAGTTGTG TGACTCGTCG CCCCATGCCA
GCCGATGTGG CTCGCAGTTA TTGTGCCCCG TATGACTCGT GGTCTAATCG CCGGGCAGTC
CATCGATTCG TGCAGGATAT TCCTTTGAAT GAGCAGCATC CCAGTTGGGT CGCTGTCTCG
AAGACCGCCC AGGCACTGCA CCGCCTGCAA TCTAAACCGA TGCTGATTGG CTGGGGCGCT
AAAGATTTTG TATTTGATGA CCATTTTCTG GCGGAATGGC GAGTTCGATT TTCTCAGGCT
CATGTCCGTT ATTTTCCTGA TTGCGGCCAC TACATCCTTG AAGATGCTCA AGAAGAGCTG
ATTCCACTGA TCTCTGATTT TGTCCGAGGA AAAGAAATCA GCTAA
|
|---|
| Protein sequence | MIVPAPFADS QFVTISGHRM HYRDAGAGRP VIMLHGNPNW SYYFRNLIDS LKATHRCLVP
DHIGCGLSDK PADRDYPYRL ERRISDITEW IDGLQLTEPV TLVVHDWGGM IGCGWAVEHV
EQVERLVILN TGAFPLPKQK PVPWQLRLAR TPGLGSLLVR GFNAFSEGAV RSCVTRRPMP
ADVARSYCAP YDSWSNRRAV HRFVQDIPLN EQHPSWVAVS KTAQALHRLQ SKPMLIGWGA
KDFVFDDHFL AEWRVRFSQA HVRYFPDCGH YILEDAQEEL IPLISDFVRG KEIS
|
|---|
| |