Gene Plim_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2567 
Symbol 
ID9139278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3338254 
End bp3339276 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_003630591 
Protein GI296122813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAGAG TCGCATTGGA CGCGATGGGC GGGGACGTGT TTCCCGGGCC CAACCTCGAA 
GGGGCGGTTA AAGCTGTTGA GGCTCTTCCC GGCATTGAAA TTGTGCTGGT GGGTGACGCA
CCCCTGTTGA GTCAAGAGAT CGCATCGCAT CCTGAGTTTG GTCGCCGTCT GACAGTTCAG
GCGGCTGATG GCTATGTCGG CATGGACGAA AAGCCGACCG ATGCCCTGCG AAGAAAGCCC
AATTGCTCTC TCGCGGTCTG CTGGCAATTG ATGGCATCGA AATCTGTTGA TGCTGTGGTG
AGTGCCGGGC ATACGGGAGC AGTTGTTGCC GCCGGATTGC GAACCCGGCT GTTTCTGAGA
AATGTGCGAC GACCTGGAAT TGCCGTGGTT TTGCCCACGA TGCGTGGTCG GTGTGTACTG
ATGGATGTGG GGGCCAATCC TGCAGCCCGT CCCGAGCACC TTCTTCAATA CGGCGTGATG
GGGGCTGTTT ACGCTCGCAA TCTGCTGGGT GTGGAAAAAC CTTCCATCGG GCTGATGAAT
ATCGGCAGCG AAGATGGCAA AGGGAATGAC CTGGTGCGTG AAGCCCAGGA GCTATATGCG
AAAAGCAAGG CCATTCAAAG CTATAATTAC GTGGGGAATG TCGAAGGTCG CGATCTGTAT
GAAGGTCGCA CTGACGTCGT GATTTGCGAA GGTTTTGTTG GCAATGTGAT CCTCAAGTCG
AGTGAAGGCA TTGTGGATAT GCTCTTCAAG ACCGTGGGGA AAGCTGTGGT TTCTGCTCTG
GATGTCGAGC GAAACAAGGC CATTGAAGCT CTGAAAGCTC TCGAGCGTAA GTACGTCTAT
CACGAGTCAG GCGGCGCACC ACTGTTGGGC GTGGATGGCA ATTGCATCAT CTGCCATGGT
TCCAGCAATG GGCATTCGAT CTTCAATGCC CTCAAGCTGG CCGATGAACT GCAGAATCGC
GGCATCAACA GCCAGATTTG CAGCGAACTG GAAGTCGATC TCCAACTGGT CGGTTCTGCC
TGA
 
Protein sequence
MARVALDAMG GDVFPGPNLE GAVKAVEALP GIEIVLVGDA PLLSQEIASH PEFGRRLTVQ 
AADGYVGMDE KPTDALRRKP NCSLAVCWQL MASKSVDAVV SAGHTGAVVA AGLRTRLFLR
NVRRPGIAVV LPTMRGRCVL MDVGANPAAR PEHLLQYGVM GAVYARNLLG VEKPSIGLMN
IGSEDGKGND LVREAQELYA KSKAIQSYNY VGNVEGRDLY EGRTDVVICE GFVGNVILKS
SEGIVDMLFK TVGKAVVSAL DVERNKAIEA LKALERKYVY HESGGAPLLG VDGNCIICHG
SSNGHSIFNA LKLADELQNR GINSQICSEL EVDLQLVGSA