Gene Plim_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2564 
Symbol 
ID9139275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3335384 
End bp3336622 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_003630588 
Protein GI296122810 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGAC GAGTCGTCGT GACAGGGATG TCGGTCGTCA CTGCCTTGGG CTGCGATCTC 
AGTGAATTCT GGGATAATAT CTGCAGCGGC AAGAGCGGTG TGTCTCGGCT GGAACGCTTT
GATCCATCGG AATTCAAAGT CAACTTTGGT GGGGAAATTA AAGATTTCCA CCCCGAAGAA
CACTTTGATC CCAAGGAAAT GAAGCGTTTG GATCGCTTTT GTCAGTTTGC CATGGCGGCA
GCAGACAAGG CGATCAAGCA GTCGGGGATC GACTTTAAAT CCTATACAGA TCCATACCGC
TGTGGCGTAA TTGTCGGCAG CGGTATTGGG GGGCTGAACG AAATCGAAGA GCAGCATGCA
AGGCTGTTCG ATCGAGGTCC GTCCCGAGTA TCCCCGTTTA TGATCCCCAA GCTGATGGTG
AATGCCGCCA GTGGGAATCT TTCAGTCTAT TATGGATTGA AAGGCCCGAG CAGTGCAGTT
GCCACCGCTT GTGCATCGGC TTCGAACGCC ATTGGTGATG CCTTCCGTGT CATCCAGTCG
GATATGGCTG ATGTCATGAT TGCGGGTGGC AGTGAAGCCG CCATTACACC TATGGGATTG
TCGGGTTTTG CCCGTATGGG GGCACTTTCG ACACGTCTGG ATTCCCCGGA GTGTGCCAGC
CGACCATTCG ATCGTGATCG TGATGGTTTT GTGCTTTCTG AGGGTGCCGG TGTGGTGTTG
CTCGAAGAAT ATGAGCATGC CAAAGCCCGT GGTGCCGAAA TCCTGGCCGA AGTGCTGGGC
TATGGGATGT CGTCTGACGG CAACCACATG ACAGCCCCCG ATCCTGAGGG AGCTGGTGCT
GCCCGTGCGA TGGCAAATTC GCTTCGCGAT GCGAAGTTGA ATCCATCTCA AATCCAGTAC
ATCAACGCTC ATGGAACCAG TACGCCCCTG GGCGATAAAG CCGAATCCAA CGCCATTATG
ACAGTTTTTG GCGAAGAGTC GAAAACCGTC TGTGTCTCCA GTACGAAGAG CCAGTTAGGT
CATCTTCTGG GTGCCAGTGG TGGGGTCGAG TTTGTGGTTG GAGTGATGAC CTGTCTGCAG
GGAATTATTC CACCCACGAT TAATCTCGAT AACCAGGATC CTGACTGCAA GCTCGATTAT
GTGCCGAACG TGGCTCGTGA GCGTGAAGTC AAGTGCATGC TTTCCAACAG CTTTGGTTTC
GGTGGCCACA ACGCCTGTCT TGTTGTGGGT CGCATCTGA
 
Protein sequence
MARRVVVTGM SVVTALGCDL SEFWDNICSG KSGVSRLERF DPSEFKVNFG GEIKDFHPEE 
HFDPKEMKRL DRFCQFAMAA ADKAIKQSGI DFKSYTDPYR CGVIVGSGIG GLNEIEEQHA
RLFDRGPSRV SPFMIPKLMV NAASGNLSVY YGLKGPSSAV ATACASASNA IGDAFRVIQS
DMADVMIAGG SEAAITPMGL SGFARMGALS TRLDSPECAS RPFDRDRDGF VLSEGAGVVL
LEEYEHAKAR GAEILAEVLG YGMSSDGNHM TAPDPEGAGA ARAMANSLRD AKLNPSQIQY
INAHGTSTPL GDKAESNAIM TVFGEESKTV CVSSTKSQLG HLLGASGGVE FVVGVMTCLQ
GIIPPTINLD NQDPDCKLDY VPNVAREREV KCMLSNSFGF GGHNACLVVG RI