| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2549 |
|---|
| Symbol | |
|---|
| ID | 9139260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3311805 |
|---|
| End bp | 3312875 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1559 |
|---|
| Protein accession | YP_003630573 |
|---|
| Protein GI | 296122795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTT TGAATGCGGC TCAACGTCGC GGCTTTACTT TGATTGAACT TCTCGTCGTG
ATCGCCATTA TCGCGATCCT GATTGCACTG CTGTTACCAG CCGTTCAACA GGCCCGTGAA
GCAGCCCGGC GGACACAGTG CCGTAACAAC CTCAAGCAGA TGGGGCTGGC ACTCCACAAC
TACGAATCCA CCTTCAGTCG TTTTCCAAGT GCTGGTGAAT TCACCGATCG CCGTGGTGGA
ACGTACTACC GAACGTTCAC ACCCACATCG ACCTTTGTGC AGATTCTGCC ATACATCGAT
CAGGCACCGC TCTACAACCA GTTCAACTTC AATTTCCACT ACTCGAATGG CTTTGTTGCC
GGCACATCGA CGGGCAATGC TCTGGCTGCA CAGGCCAAGA TCAATGCCTT CCTGTGCCCT
TCAAATGCCA ACACACCGGT CGATCCACAG AACTTCGGCC AGACAGATTA CATGCCTGTC
GCCTACACCG ACCTCAACGG TACGACAGGC GAACGCGCTA AGCTCAACAC GACCTGGGAT
CGTGACTCCG TTCTGGGATT CTTCAACCGG CTAAGTGACA CAACCGATGG TTTGACCAAC
ACCATTGCCA TCATCGAAGA TTCGGGCAAA ACGACTGTCG TCACAGGCTC TTACACCGCC
GGTGCTCTTT TCGGCCCCGT CGCAGGTACT CCGCTGACAC AGCAAGGCGT CGTCGCAGCC
GCCATGCCCG GAACTTCGAA CACATGCCCC AATCGCTGGG CTGATCCAGA TTCAGGGAGT
GGTGTCTCCG GTTCCCCACT TCGCGATCCA GCCAGCACAT CGCCGGCTTA CAGCGCAACA
GCTCCAATTG CCGTCATCAA CAACAACAAA ACGCCCAATG GTGGTGGAAC AGCATGTCCC
TGGAGTTCCA ACAACTGCGG GCCCAACGAT GAGCCATTCA GCCTCCACAC CGGTGGTGTC
CATGCCCTGC TCGGCGATGG CAGCGTGAAA TTCATCTCCG AGAACATTGA CGTCCAGACC
GTCCGCCGCC TGCTCAGCCG TGCGGATGGC GAACAAGTGG GCGAGTTCTA A
|
|---|
| Protein sequence | MLRLNAAQRR GFTLIELLVV IAIIAILIAL LLPAVQQARE AARRTQCRNN LKQMGLALHN
YESTFSRFPS AGEFTDRRGG TYYRTFTPTS TFVQILPYID QAPLYNQFNF NFHYSNGFVA
GTSTGNALAA QAKINAFLCP SNANTPVDPQ NFGQTDYMPV AYTDLNGTTG ERAKLNTTWD
RDSVLGFFNR LSDTTDGLTN TIAIIEDSGK TTVVTGSYTA GALFGPVAGT PLTQQGVVAA
AMPGTSNTCP NRWADPDSGS GVSGSPLRDP ASTSPAYSAT APIAVINNNK TPNGGGTACP
WSSNNCGPND EPFSLHTGGV HALLGDGSVK FISENIDVQT VRRLLSRADG EQVGEF
|
|---|
| |