| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2534 |
|---|
| Symbol | |
|---|
| ID | 9139245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3293834 |
|---|
| End bp | 3294337 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | Redoxin domain protein |
|---|
| Protein accession | YP_003630558 |
|---|
| Protein GI | 296122780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTG CTGGGGCAAC AACACTCAAG GGAAATCCTG TCGATCTGAA GGGCCGTGCG
ATTGTTGTGG GAGATGTCGC ACCCACATTT TCACTGCAGG CCAACGATCT CAGTGAAGTC
ACACTGAGTG GCAAGACCAC CATTATTGCC ACGGTCCCTT CGCTCGATAC TTCAGTTTGC
GCTCTCGAAA CCAAGAAGTT CAACGACGAA GTCAAGAATC TGCCGAATGT CGATGTCTTC
GTCGTCAGTA TGGATCTCCC CTTTGGCAAC AAGCGCTGGT GTGCTTCGGA AGGGGTCGAG
AACATCAAGA CGCTCTCCGC TCATCGCTGC ACCGATTTTG GTGTCGATTA CGGCGTGCTG
ATCAGCGGCG GCCCACTCGA TCGTTGCCTC GCCCGCGCTG TTTTTGTGGT GGGTGCCGAT
GGCAAGGTGA AGTACGTCGA ATACTGCAAG GAAATCGCCG ATCATCCCAA CTACGAAGCT
GTGCTCGCAG CTGCGAAGTC GTAA
|
|---|
| Protein sequence | MKRAGATTLK GNPVDLKGRA IVVGDVAPTF SLQANDLSEV TLSGKTTIIA TVPSLDTSVC
ALETKKFNDE VKNLPNVDVF VVSMDLPFGN KRWCASEGVE NIKTLSAHRC TDFGVDYGVL
ISGGPLDRCL ARAVFVVGAD GKVKYVEYCK EIADHPNYEA VLAAAKS
|
|---|
| |