Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2524 |
Symbol | |
ID | 9139235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3283652 |
End bp | 3285271 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | chaperonin GroEL |
Protein accession | YP_003630549 |
Protein GI | 296122771 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.885938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGA TTCTTGCATT TGACCAGGAA GCCCAGGAAG CGATGCGTCG CGGCGTCAGC AAGCTCGCCA AGACCGTCCG CGTTACTCTC GGCCCACGCG GCCGCAACGT GATCATCGAA AAGAGCTTCG GCTCCCCCAC TGTCACCAAG GACGGCGTAA CCGTCGCCAA GGAAGTCGAA CTGGCCGATA AGTTCGAAGA CATGGGCGCC CGCATGGTTC GCGAAGTCGC TTCCAAGACC AGCGATAACG CTGGCGATGG TACGACCACC GCAACTGTTC TCGCCGAAGC CATCTACGTC GAAGGCCTCA AGGCTGTCGT CGCTGGTGTG AACCCCATCG ACCTCAAGCG CGGCATGGAT AAGGCCGTCG AGCAGATCGT CGGCAAGCTC AAGGCTGCCG CCGTCGAGTG CAAGAGCAAG AAGGCCATCG CCCAGGTCGG GACTGTCGCT GCTAATGGCG ATACCGAAAT CGGCGATATC CTCGCCAACG CCATGGAACA GGTCGGCAAA GACGGCGTCA TCACTGTCGA CGAAGGCAAG AGCCTCAAGA CCGATTTCGA AGTCGTCGAA GGGATGCAGT TCGATCGCGG CTACCTCTCC CCCTACTTCG TCACCGATCC CCAGACGATG GAATGCGTCC TCGAAGACGC TTATGTCCTG ATCCACGAAA AGAAGATCAG CAGCATCAAG GATCTCGTCC CTGTGCTGGA GAAGGTCGTC AACAGCGGCA AGCCACTCCT CATCGTCGCT GAAGAAGTCG ATGGTGAAGC CCTCGCCACA CTGGTGATCA ACAAGCTCCG CGGCACCTTC AAGATCTCCG CCGTCAAGGC TCCCGGCTAC GGCGACCGCC GCAAGGCCAT GCTCCAGGAT CTCGCGATCA TGGTCGGCGG CCAGGCGATC TTCGAAGACC TCGGCATCCA GCTCGAAAAC GTCCAACTCT CCGATCTCGG CCGCGCCAAG CGGATCGTCA TCGACAAGGA CAACACCACC ATCATCGAAG GGGCCGGCAA GGCTGCCGAC GTCAAGAGCC GCATCGAGCA GATCCGTCGT GAACTGGCCA GTTCGACCAG CGACTACGAC AAGGAAAAGC TCGAAGAGCG TATTGCCAAG CTCTCCGGCG GCGTGGCCCG CGTGAATGTC GGTGCTGCCA CCGAAAGCGA AATGAAGGAA AAGAAGGCCC GCGTTGAAGA CGCTCTGCAC GCCACCCGCG CTGCTGTTGA AGAAGGCATT CTTCCTGGTG GTGGGGTCGC CCTGCTCCGC GCTTCGCTCG ACCTCAAGCC CACTGGCCTG AACCATGATG AAACCGCCGG TTTCAACATC ATCTTGCGGG CTTGCCGGGC ACCTCTCACA CAGATCTCGA ACAACGCCGG CGTCGACGGC GCGGTGATCT GCGAGAAGGT TTCCGAGCTC AAGGGGAACA TGGGCTACAA CGCCGCCACC GGCGAGTACG AAGACCTCGT CAAGAGCGGG ATCATCGACC CAGTGAAGGT GACCCGCACC GCTCTCCAGA ACGCAGCCAG CGTCTCGACC CTGCTGCTGA CCAGCGACTG CCTGATCGCC GAGAAGCCCA AGGCCGAAGA TAAAGCCCAC GGCGGCCACG GCGACCATGA CATGTACTAA
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Protein sequence | MAKILAFDQE AQEAMRRGVS KLAKTVRVTL GPRGRNVIIE KSFGSPTVTK DGVTVAKEVE LADKFEDMGA RMVREVASKT SDNAGDGTTT ATVLAEAIYV EGLKAVVAGV NPIDLKRGMD KAVEQIVGKL KAAAVECKSK KAIAQVGTVA ANGDTEIGDI LANAMEQVGK DGVITVDEGK SLKTDFEVVE GMQFDRGYLS PYFVTDPQTM ECVLEDAYVL IHEKKISSIK DLVPVLEKVV NSGKPLLIVA EEVDGEALAT LVINKLRGTF KISAVKAPGY GDRRKAMLQD LAIMVGGQAI FEDLGIQLEN VQLSDLGRAK RIVIDKDNTT IIEGAGKAAD VKSRIEQIRR ELASSTSDYD KEKLEERIAK LSGGVARVNV GAATESEMKE KKARVEDALH ATRAAVEEGI LPGGGVALLR ASLDLKPTGL NHDETAGFNI ILRACRAPLT QISNNAGVDG AVICEKVSEL KGNMGYNAAT GEYEDLVKSG IIDPVKVTRT ALQNAASVST LLLTSDCLIA EKPKAEDKAH GGHGDHDMY
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