Gene Plim_2524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2524 
Symbol 
ID9139235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3283652 
End bp3285271 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content60% 
IMG OID 
Productchaperonin GroEL 
Protein accessionYP_003630549 
Protein GI296122771 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.885938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGA TTCTTGCATT TGACCAGGAA GCCCAGGAAG CGATGCGTCG CGGCGTCAGC 
AAGCTCGCCA AGACCGTCCG CGTTACTCTC GGCCCACGCG GCCGCAACGT GATCATCGAA
AAGAGCTTCG GCTCCCCCAC TGTCACCAAG GACGGCGTAA CCGTCGCCAA GGAAGTCGAA
CTGGCCGATA AGTTCGAAGA CATGGGCGCC CGCATGGTTC GCGAAGTCGC TTCCAAGACC
AGCGATAACG CTGGCGATGG TACGACCACC GCAACTGTTC TCGCCGAAGC CATCTACGTC
GAAGGCCTCA AGGCTGTCGT CGCTGGTGTG AACCCCATCG ACCTCAAGCG CGGCATGGAT
AAGGCCGTCG AGCAGATCGT CGGCAAGCTC AAGGCTGCCG CCGTCGAGTG CAAGAGCAAG
AAGGCCATCG CCCAGGTCGG GACTGTCGCT GCTAATGGCG ATACCGAAAT CGGCGATATC
CTCGCCAACG CCATGGAACA GGTCGGCAAA GACGGCGTCA TCACTGTCGA CGAAGGCAAG
AGCCTCAAGA CCGATTTCGA AGTCGTCGAA GGGATGCAGT TCGATCGCGG CTACCTCTCC
CCCTACTTCG TCACCGATCC CCAGACGATG GAATGCGTCC TCGAAGACGC TTATGTCCTG
ATCCACGAAA AGAAGATCAG CAGCATCAAG GATCTCGTCC CTGTGCTGGA GAAGGTCGTC
AACAGCGGCA AGCCACTCCT CATCGTCGCT GAAGAAGTCG ATGGTGAAGC CCTCGCCACA
CTGGTGATCA ACAAGCTCCG CGGCACCTTC AAGATCTCCG CCGTCAAGGC TCCCGGCTAC
GGCGACCGCC GCAAGGCCAT GCTCCAGGAT CTCGCGATCA TGGTCGGCGG CCAGGCGATC
TTCGAAGACC TCGGCATCCA GCTCGAAAAC GTCCAACTCT CCGATCTCGG CCGCGCCAAG
CGGATCGTCA TCGACAAGGA CAACACCACC ATCATCGAAG GGGCCGGCAA GGCTGCCGAC
GTCAAGAGCC GCATCGAGCA GATCCGTCGT GAACTGGCCA GTTCGACCAG CGACTACGAC
AAGGAAAAGC TCGAAGAGCG TATTGCCAAG CTCTCCGGCG GCGTGGCCCG CGTGAATGTC
GGTGCTGCCA CCGAAAGCGA AATGAAGGAA AAGAAGGCCC GCGTTGAAGA CGCTCTGCAC
GCCACCCGCG CTGCTGTTGA AGAAGGCATT CTTCCTGGTG GTGGGGTCGC CCTGCTCCGC
GCTTCGCTCG ACCTCAAGCC CACTGGCCTG AACCATGATG AAACCGCCGG TTTCAACATC
ATCTTGCGGG CTTGCCGGGC ACCTCTCACA CAGATCTCGA ACAACGCCGG CGTCGACGGC
GCGGTGATCT GCGAGAAGGT TTCCGAGCTC AAGGGGAACA TGGGCTACAA CGCCGCCACC
GGCGAGTACG AAGACCTCGT CAAGAGCGGG ATCATCGACC CAGTGAAGGT GACCCGCACC
GCTCTCCAGA ACGCAGCCAG CGTCTCGACC CTGCTGCTGA CCAGCGACTG CCTGATCGCC
GAGAAGCCCA AGGCCGAAGA TAAAGCCCAC GGCGGCCACG GCGACCATGA CATGTACTAA
 
Protein sequence
MAKILAFDQE AQEAMRRGVS KLAKTVRVTL GPRGRNVIIE KSFGSPTVTK DGVTVAKEVE 
LADKFEDMGA RMVREVASKT SDNAGDGTTT ATVLAEAIYV EGLKAVVAGV NPIDLKRGMD
KAVEQIVGKL KAAAVECKSK KAIAQVGTVA ANGDTEIGDI LANAMEQVGK DGVITVDEGK
SLKTDFEVVE GMQFDRGYLS PYFVTDPQTM ECVLEDAYVL IHEKKISSIK DLVPVLEKVV
NSGKPLLIVA EEVDGEALAT LVINKLRGTF KISAVKAPGY GDRRKAMLQD LAIMVGGQAI
FEDLGIQLEN VQLSDLGRAK RIVIDKDNTT IIEGAGKAAD VKSRIEQIRR ELASSTSDYD
KEKLEERIAK LSGGVARVNV GAATESEMKE KKARVEDALH ATRAAVEEGI LPGGGVALLR
ASLDLKPTGL NHDETAGFNI ILRACRAPLT QISNNAGVDG AVICEKVSEL KGNMGYNAAT
GEYEDLVKSG IIDPVKVTRT ALQNAASVST LLLTSDCLIA EKPKAEDKAH GGHGDHDMY