Gene Plim_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2427 
Symbol 
ID9139138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3166099 
End bp3166845 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content60% 
IMG OID 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003630452 
Protein GI296122674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTG AATCGGAAGA CGATGTCGCC GCGCTCAAAC GGATCGGTGG AATTGTCGCC 
AACGTATTAC GAGAGATGCT GGCGGCCGCA GTACCGGGAA TGACGACGCG GGAACTGGAC 
GCGATCGGTG AGAGATTACT GGAGCGTTAT GGCGCCCGAT CAGCACCGCG CCTCGCCTAC 
AACTTCCCTG GTGCCACCTG CATCAGCATC AACGAAGAAG CGGCTCACGG AATTCCGGGT 
GAGCGGGTGA TCCAACCGGG CGATGTCTTG AACATCGATG TCTCCGCCGA GCTGGATGGC 
TACTTCGCCG ACACCGGGGG GACGAAGGTG TTGCCGCCCA CTAATCCGCA GAAGACGCGG 
TTGTGCGAGG CGACTCGCAA GGCTCTGGAA GCAGCCATGC AGCGAGCCAC TGCCGGGCAG 
CCGATCCATG GGATCGGCGC AGCGATCCAG CGAACAGCAG AAAGGCATGG CTTCCAGGTG 
TTCGAAAACC TGGGCAGCCA CGGAATTGGC CGGGCGCTGC ATGAAGCCCC CGAGCATATC 
GCCGGCTACT ACGATCCGAC CGACCGCAGG CGATTGAAAG AGGGGATGGT CATCACCATT 
GAGCCATTCC TTTCCACCAG AAGCCGACTG GTCAAGGAGC AACCCGACGG CTGGACACTG 
GTGGGAGCAC GCGGCAATTT ATCGGCCCAG TACGAGCACA CGATGATCAT CACCAAAGGA 
ATGCCGATTG TTGTAACGGG TTGGTAA
 
Protein sequence
MTIESEDDVA ALKRIGGIVA NVLREMLAAA VPGMTTRELD AIGERLLERY GARSAPRLAY 
NFPGATCISI NEEAAHGIPG ERVIQPGDVL NIDVSAELDG YFADTGGTKV LPPTNPQKTR 
LCEATRKALE AAMQRATAGQ PIHGIGAAIQ RTAERHGFQV FENLGSHGIG RALHEAPEHI 
AGYYDPTDRR RLKEGMVITI EPFLSTRSRL VKEQPDGWTL VGARGNLSAQ YEHTMIITKG 
MPIVVTGW