Gene Plim_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2404 
Symbol 
ID9139115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3134712 
End bp3135713 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content56% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003630429 
Protein GI296122651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.9022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGCAG CCTCGCATGA TGATGGATAC TGGCTGGGGT TTGATTTAGG CGGCACAAAA 
ATGCATGCCG GTCTGTTTGA CCGCAAGCTG CAACCTGTGG GCCACCGGAG AAAGAAAACC
CGCGGGCATG AAGGTGCCGA AGCGGGTGTG GAGCGAATTT GCAACAGCAT TGAAAAGCTG
CTTGTGGAAC TGGATGTCTC AGTTTCTCAA TTGCGCGGGA TCGCAGTAGG CTGCCCGGGG
CCGTTGGATC TCGACAAGGG AATCATTGTC GAGTCTCCGA ATCTGGGTTG GAAGAATGTG
CCACTGAAGG ACATTCTGGA AAAGCGATTT GGTTGCGAGG CCACCATTCT CAATGATGTT
GACGCCGGTG TGTATGGCGA GCATCGCTTT GGAGCAGGTT CCGGTGCCCG CACGACTTTG
GGAGTTTTTC CTGGGACAGG GATCGGTGCA GGTCTCGTCT ATGAGGGTCG AATTTACCGC
GGTCGCAAGT CGTCTTGTCT GGAATTGGGG CACATTCCGG TGGTGCCCAA TGGGGCCATG
TGCGGTTGTG GCCGCCGAGG ATGCCTGGAA ACGGTCGCGA GTCGACTGGC GATGTCGGCA
GAGATTGCCA AGGCGGCCTA TCGAGGGCAG GCCCCCCATC TGATGAGGGT TGCAGGAACG
GACCTGGCGA ACATTCGCAG TGGAACATTG GCCGAGGCCA TCAGCGATGG TGATACAGTG
GTGGAGAAGA TTGTTCGCGA TGGCGCCCAC CATCTGGGCG TAGCGATTGC AGGAACTGTC
AACCTGCTGC TTCCCGATGT GATTGTATTG GGCGGGGGGT TGGTGGAGGC ATTGCCCAAG
CTCTTCCTGG AAGAAGTTCA AAATGCATTG GGATCTCATA TCATGCCCGC CTACGAAGGG
GCTGTCGAAG TTAAAGTTGC CAAGCTGGGA GATGATGCCG GTGCACTGGG TGCTGCCGCC
TGGATTCGTC ATCTCGTCGA AGAGAAAACT GCCAAGAATT GA
 
Protein sequence
MIAASHDDGY WLGFDLGGTK MHAGLFDRKL QPVGHRRKKT RGHEGAEAGV ERICNSIEKL 
LVELDVSVSQ LRGIAVGCPG PLDLDKGIIV ESPNLGWKNV PLKDILEKRF GCEATILNDV
DAGVYGEHRF GAGSGARTTL GVFPGTGIGA GLVYEGRIYR GRKSSCLELG HIPVVPNGAM
CGCGRRGCLE TVASRLAMSA EIAKAAYRGQ APHLMRVAGT DLANIRSGTL AEAISDGDTV
VEKIVRDGAH HLGVAIAGTV NLLLPDVIVL GGGLVEALPK LFLEEVQNAL GSHIMPAYEG
AVEVKVAKLG DDAGALGAAA WIRHLVEEKT AKN