Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2361 |
Symbol | |
ID | 9139071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3068559 |
End bp | 3071900 |
Gene Length | 3342 bp |
Protein Length | 1113 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | ATP-dependent nuclease subunit B-like protein |
Protein accession | YP_003630386 |
Protein GI | 296122608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAGA TTTTGACTGG CACTGGTGCC GCACGTCATC AGGAGGCACT GGCGCGCTAT GCCAGTCATC TTGGTCAGGG TCTCGCAGAC GGTCAATTGG GGACTGGCCT GTGGCTCACA CCCTCGGCAC GCACGCACTC GAAGACTTAT CAGGCTTTGC TGGAATTACT GAAGGGCAAG ATTGCCGCCC CCAACCTGCA TACGTTTGAG TCGTTCTCTG AGATCATTCT GAGTCATGGG TCTGCGGCAG CGACTCCCAT TACGCCATCC ACGCAGTTTC TGCTGCTGTC ACACGCGATC CAGACCGTCT ATCAGCGGGG CGACTGCGAG GAGTTCAGCG CTGTCATCGA GACTCGGGGT TTGACAAAAA TCGTCAGTGA CTGGATTGCC GAGCTTAAGC GGGATGAAAC GTGGCCTGAG GAATTTCTCA AAAGCTGCCA GCAGCAAAAA GGGGGCGCGA CAGGCAAGGA TCTGGCACTG GCGGCGATTT ATCACGAATA CCAGGCATTG CTCAATGCAC GCGGCTGGTA CGATCAGGAA GGTCGATCGT GGTTAGCTCG GGCAGCCGTC TCCCAGGGAG CCAGGGCACC TTTCGATCAG GTGCGGCTTG TGGTCTGCGA TGGTTTCGTC GACTTCACGT GGATTCAGTA CGAGTTACTC GAGCAATTTG CGAGATGGAA CGCCGACATT GTCATCACCT TGCCCGATGA ATTCGCCAGC CAGCGGAATA CGTCTTTTGA TCGAAGCGAA CTGTTTGCGA TTCCTCGCCG AACACTTGAG ATTCTGAAGT CGCGAATCAA ACCCCTGCAA GAGATTCGAG TCCACTCGAT ATCGACAAAT CCAGATCATG GAGCTGTTCC TACGGGAATC GAACAACTTG CACGGAATCT TTTTGGTAAC CCGCGAATTG TCAGCCGATG TTCAACGGCT GCCGGGTTTG ATGCGATTGC TGCGGGTGGG CCGCATCGCG AGCTGGAGGC GGTCAGTCAT CAGATCAAGA AGTGGCGTTC GAGTGGTTTT TTGGCCGAAG AGATCGTGGT TGTGGTTCGA GGCCTGGCGA GTGAAGCCTC GCGCTGGCTG GATCATTTCG AATTGGCGGG GATACCGGCT TATGCTCCTC AGGCCTCATC GCTGGAAAGC TGTCCCGTCG TGCGCTGGAT GGCTCAACTG GTCAAACTGG AATTGAATGA CTGGACGAGC CACGACCTGC GTCTGGTCGT CTCATCGACA TTTTTTCGCC CTGCCCAGTT TCCCTCCAAA GCCAAGCGGG CCTTATTGGC GTGGCTGGCG AAATCACCCG CTTCGAGCCG CAAAATTCTT AGCTTGAAAG CCCGCGAACG GGCGGCAGAT CCCAGCGCAT TGACAACTGA GAAAGAGATC AATCACACGC TGGTCAGTCA GGGGTTGGAA ACACTGCTGC GTGTGACCGA GAAACTCAGT ACATCGCACA GCTTTGAAGG GTGGATTGAT CTGTGGGCGG CGATCATCAG TCAATGGACA CCCTTCTTGC CGGATTCATC AAACGATAGG GCAGATCGTG CGGATTGGGA ACTTCTGCAA AGGATTCTCC GCCGGGTTTC TCGCTGCCGG GGGACATGGC AAGAGCCTTC CGAACGACTC AGTCTGCAGG CGTGGTGGAG CGAAGTCGAA GCCTGCCTGA GTGTGGAACG CAGTTTGCCT CCGGCTCCAT CCCCAGGAAT GATTTCGCTG ATTGATCCGG CCCAGGCACG ATTTCTCGAT TCAGCGCGGT GCGTCGTGAT TGTGGGTGCG ACCGAACAGG CTTACCCGGC GGCAGATCAT ACCAATTGCC TTTACAGTCA TGCCGAGCGT CAAAGCCTGA TTGCAGCGGG TCTTCGGCTG GTACGGGAAG AGGATCATTC TTCCGAAGAG ACGCTGCTTT TCTGGCAACT GGTCTCCATG GCCACGGAGA ATCTGCTGAT CACCTATCCC GCGATCAATG CCAAAGGACA GGAGCTTTTT CCCAGCCCAT TTGTGCTGGC GGCCTGCGAC CTATTCACAA AAGACGTGCA GTTGCCCCGG CATGTGGGAT CGATCCATGT CATGCCGGAG CGGGAAGAGA TTCATACCCG CCGGGACTTG CGCATTGTGG CGTTTGAGCA GGCGATGACA GGCCATGCGG GCTGGTGGAA GACGGGTTTG CTGGACACGA CCGAGGGTCA GGCCTATCGG AATATGGCTC GCGGTCTCCC CATGCTGCAG GCTCGATATC GAACAGAAGG CTTTACTGAG TACGAGGGAA TGCTCAACGA ACCTGCTCTT CGCGAGGAGT TTGCGCGCCA ATATGGGCCA GAGCATCAAT TCAGCGTGAC GAGATTAGAA CTTTATGCCA ATTGTCCGTT TCGATTCTGG ATCGAAGAGG TGCTGGGACT CGCGCCACGT GAGACAAAGC AACTCTCGAC GAATTACCTC ATGAGAGGGA CTGCTCTTCA TAGTGCCTTA GCGTCCCTAT TGGGAAGTGG CCGGCTGGCA TTGGCTGATG AAGCGGAATT GAGCCGGATT TTTGCCGAAC ATGTGGCTGT CGAAATGCAG CGCCGGGCGA AAGGTTCTCC GCTGGCAGAA GCCATGGCCC GGCTGGATTC CCAGATTGTC AGTGCGTGGA GCGAACAATT TGCTGCGTCA CAAAGAGAGT ATCTGGAAAC GATGGTCAGT GCCTGGGGAG GCATGCCCGA AACCACATTG CCGGAAGTTG CCTTTGGACA GGTTTACGAT GATCACGGGG AGTTGATTCA CGGGCCGTAC CCTGCCCTGG AGATTTCGCG AGGCGGGCAT CTGGTACGGC TGGGTGGCAA GATCGACCGG ATTGATGCTC ACAAACTTCC TACTGGTGAG CAGTTCTTTT CGATTATCGA TTACAAATCG GGCGGGGCGA GCCAATACCG GTTCGACGAA AAGGCTGTGC AGCAGGGATT GAGCCTGCAG CTGGTGGTCT ATCTGCTGGC TGTAAAACGA TTGAGAATGG CGGGAGATGA TGCTGAAGCA TGGCAGGCGG GCTTCTGGGG ATTGCGAAAA GAAGGCCTCG TGGCAGGTTT GAAAGCCGGG AGGAAGTCCA AAGAATGGAA TCGCCTCGAT GAAGATTCTG TCCACCGGCT TGAAGAGGCT GTCCAGCAAA GTGTGATTGA TCTGGCCATC AGTATTCGCA ATGGTGAATT CATGGTCGAT GGAGCGACCA AATTGAAACC CAGCCCTTGC AGCAGTCAAT GTCCGACCGC GACAGTGTGC CGGGTGAAAC AGCAGGTCGG CCTCGCGAAA CAGCTCCATA AAATTCGGCC AGCACTGGAT GCGCCGCGGG CGACCAGCCC TGTCGAAAGT CCAGCCTCCT GA
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Protein sequence | MLEILTGTGA ARHQEALARY ASHLGQGLAD GQLGTGLWLT PSARTHSKTY QALLELLKGK IAAPNLHTFE SFSEIILSHG SAAATPITPS TQFLLLSHAI QTVYQRGDCE EFSAVIETRG LTKIVSDWIA ELKRDETWPE EFLKSCQQQK GGATGKDLAL AAIYHEYQAL LNARGWYDQE GRSWLARAAV SQGARAPFDQ VRLVVCDGFV DFTWIQYELL EQFARWNADI VITLPDEFAS QRNTSFDRSE LFAIPRRTLE ILKSRIKPLQ EIRVHSISTN PDHGAVPTGI EQLARNLFGN PRIVSRCSTA AGFDAIAAGG PHRELEAVSH QIKKWRSSGF LAEEIVVVVR GLASEASRWL DHFELAGIPA YAPQASSLES CPVVRWMAQL VKLELNDWTS HDLRLVVSST FFRPAQFPSK AKRALLAWLA KSPASSRKIL SLKARERAAD PSALTTEKEI NHTLVSQGLE TLLRVTEKLS TSHSFEGWID LWAAIISQWT PFLPDSSNDR ADRADWELLQ RILRRVSRCR GTWQEPSERL SLQAWWSEVE ACLSVERSLP PAPSPGMISL IDPAQARFLD SARCVVIVGA TEQAYPAADH TNCLYSHAER QSLIAAGLRL VREEDHSSEE TLLFWQLVSM ATENLLITYP AINAKGQELF PSPFVLAACD LFTKDVQLPR HVGSIHVMPE REEIHTRRDL RIVAFEQAMT GHAGWWKTGL LDTTEGQAYR NMARGLPMLQ ARYRTEGFTE YEGMLNEPAL REEFARQYGP EHQFSVTRLE LYANCPFRFW IEEVLGLAPR ETKQLSTNYL MRGTALHSAL ASLLGSGRLA LADEAELSRI FAEHVAVEMQ RRAKGSPLAE AMARLDSQIV SAWSEQFAAS QREYLETMVS AWGGMPETTL PEVAFGQVYD DHGELIHGPY PALEISRGGH LVRLGGKIDR IDAHKLPTGE QFFSIIDYKS GGASQYRFDE KAVQQGLSLQ LVVYLLAVKR LRMAGDDAEA WQAGFWGLRK EGLVAGLKAG RKSKEWNRLD EDSVHRLEEA VQQSVIDLAI SIRNGEFMVD GATKLKPSPC SSQCPTATVC RVKQQVGLAK QLHKIRPALD APRATSPVES PAS
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