Gene Plim_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2320 
Symbol 
ID9139025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3006993 
End bp3007868 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003630345 
Protein GI296122567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTCG GCAAAGTCCA ACTGGTCGAT GGGGAAGTTC GTGTCGCACT GGGAGAAGAG 
GGAACCTGGA AGCTGCTGGA TTTGTTGCAG GTCGATCATG TCCGCAGTCT GGCAGATATC
CTGCATGCTC CCGATCCGTT GGGGTTGGCG CGATATCTGG TGGATGGGTC ATTGAGCCCT
GTACCAGTGG AAGAACTCAA ATTCCTGGCC CCCGTTGACA GGCAGGAAGT CTGGGCAGCT
GGTGTGACCT ACCGGCGTAG TCAGGTCGCT CGTATGGAAG AGTCCGAAGC GGGTGCTTCG
CATTACGACA AAGTCTATAC AGCCCCCCGA CCTGAGATTT TCTTCAAAGC CACACCAGCT
CGAGTTTCGG GGCCTGGCCA GGCGTTAAGA GTTCGTTCAG ATAGCCAATG GTCGGTTCCT
GAACCCGAAC TGGCTCTGGT GATTTCACCC GAAGGTAAAC TGGTGGGCTA CACCGTGGGC
AATGATATGT CGGCACGGGA TATCGAAGGT GAGAATCCTC TCTATTTGCC ACAGGCTAAA
GTCTATAACC AATGCTGCGG GCTGGGCCCC TGGGTACGAC TGGCGAGCAA CCCTTTAACA
CTGGAGGGGA ACGCCGTTCG ACTCAAGATC CGCCGCGATG GGCAGGTTGT CAGTCAGGAT
GAAACTCATC TGGGCATGCT CAAGCGATCT TTCAGCGAAC TGATTCACTG GCTGACATTT
GAGAATGATG TTCCCCAAGG TGCCTTCCTG CTGACAGGGA CCGGGATTGT TCCTGAAAAC
AATTTCTCTC TGGAGCAGGG AGATGAAGTC TCGATTGAGA TTGAAGGGAT CGGGACATTA
ACCAACCCCA TCGTGAAAGC TGCTGCTCAA GCCTGA
 
Protein sequence
MYLGKVQLVD GEVRVALGEE GTWKLLDLLQ VDHVRSLADI LHAPDPLGLA RYLVDGSLSP 
VPVEELKFLA PVDRQEVWAA GVTYRRSQVA RMEESEAGAS HYDKVYTAPR PEIFFKATPA
RVSGPGQALR VRSDSQWSVP EPELALVISP EGKLVGYTVG NDMSARDIEG ENPLYLPQAK
VYNQCCGLGP WVRLASNPLT LEGNAVRLKI RRDGQVVSQD ETHLGMLKRS FSELIHWLTF
ENDVPQGAFL LTGTGIVPEN NFSLEQGDEV SIEIEGIGTL TNPIVKAAAQ A