Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2309 |
Symbol | |
ID | 9139014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2985342 |
End bp | 2986157 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003630334 |
Protein GI | 296122556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.937555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCAGG TTCTCGAACA TCGATCCGCC GGTGCTGCTC AACAGACTTT GCTCGAAGTC AAAGATCTGG GGATTTCTTT TGGTGGTCTG AAGGCTGTTC AGAATTTCAA TCTGACGTTA CCCAGCGCCG GGCTCTATGG CCTCATTGGC CCTAACGGTG CTGGCAAGAC CACCGTGTTC AATCTGCTCA CGGGGATCTA TCAGCCCCAG ACAGGATCGT TATCGCTGAA CGGGAAAAAT CTGCTCGGTT GCAAACCGCA TGAGGTGACG GCCGCGGGGA TTGCTCGAAC ATTTCAGAAT ATCCGCCTGT TCCCGAACCT GAGCATCCTC GACAACGTGC GGCTGGCTGG CCAGATTCGC ATTCGCCCCA AGCTGTTATC AACGTTTTTG CGTACAAACG GCTATCGAGA GCAGGAAGCG GCTTTGAAAG CCCAGGCCAT GGATCTGCTG GAGATCTTCG ATCTTCAGGA TCGCGCGGAA GATCTGGCAC AGAACCTCAG TTATGGCCAT CAGCGGCGGC TGGAAATCAT TCGCGCATTA GCAACAAAAC CTTCAGTACT CTTACTGGAT GAGCCTGCAG CCGGGCTGAA TCCTCAGGAA AAACTGGCCC TGGCGCAGTC CATCCGGCAG ATCCGCGATC GATTTGAAGT GGCGATTTTA TTGATCGAAC ACGACATGCA ACTCGTGATG GATATCTGCG AGAGAATTGT GGTGCTCGAT CATGGAGTCA CGATCTGCGA AGGCACGCCA CAAACTGTGC AAAACGATGA AAAGGTGATT GCAGCCTATC TGGGGGCGAT TGCCGACGAC GCTTAA
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Protein sequence | MNQVLEHRSA GAAQQTLLEV KDLGISFGGL KAVQNFNLTL PSAGLYGLIG PNGAGKTTVF NLLTGIYQPQ TGSLSLNGKN LLGCKPHEVT AAGIARTFQN IRLFPNLSIL DNVRLAGQIR IRPKLLSTFL RTNGYREQEA ALKAQAMDLL EIFDLQDRAE DLAQNLSYGH QRRLEIIRAL ATKPSVLLLD EPAAGLNPQE KLALAQSIRQ IRDRFEVAIL LIEHDMQLVM DICERIVVLD HGVTICEGTP QTVQNDEKVI AAYLGAIADD A
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