Gene Plim_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2309 
Symbol 
ID9139014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2985342 
End bp2986157 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content53% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630334 
Protein GI296122556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.937555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGG TTCTCGAACA TCGATCCGCC GGTGCTGCTC AACAGACTTT GCTCGAAGTC 
AAAGATCTGG GGATTTCTTT TGGTGGTCTG AAGGCTGTTC AGAATTTCAA TCTGACGTTA
CCCAGCGCCG GGCTCTATGG CCTCATTGGC CCTAACGGTG CTGGCAAGAC CACCGTGTTC
AATCTGCTCA CGGGGATCTA TCAGCCCCAG ACAGGATCGT TATCGCTGAA CGGGAAAAAT
CTGCTCGGTT GCAAACCGCA TGAGGTGACG GCCGCGGGGA TTGCTCGAAC ATTTCAGAAT
ATCCGCCTGT TCCCGAACCT GAGCATCCTC GACAACGTGC GGCTGGCTGG CCAGATTCGC
ATTCGCCCCA AGCTGTTATC AACGTTTTTG CGTACAAACG GCTATCGAGA GCAGGAAGCG
GCTTTGAAAG CCCAGGCCAT GGATCTGCTG GAGATCTTCG ATCTTCAGGA TCGCGCGGAA
GATCTGGCAC AGAACCTCAG TTATGGCCAT CAGCGGCGGC TGGAAATCAT TCGCGCATTA
GCAACAAAAC CTTCAGTACT CTTACTGGAT GAGCCTGCAG CCGGGCTGAA TCCTCAGGAA
AAACTGGCCC TGGCGCAGTC CATCCGGCAG ATCCGCGATC GATTTGAAGT GGCGATTTTA
TTGATCGAAC ACGACATGCA ACTCGTGATG GATATCTGCG AGAGAATTGT GGTGCTCGAT
CATGGAGTCA CGATCTGCGA AGGCACGCCA CAAACTGTGC AAAACGATGA AAAGGTGATT
GCAGCCTATC TGGGGGCGAT TGCCGACGAC GCTTAA
 
Protein sequence
MNQVLEHRSA GAAQQTLLEV KDLGISFGGL KAVQNFNLTL PSAGLYGLIG PNGAGKTTVF 
NLLTGIYQPQ TGSLSLNGKN LLGCKPHEVT AAGIARTFQN IRLFPNLSIL DNVRLAGQIR
IRPKLLSTFL RTNGYREQEA ALKAQAMDLL EIFDLQDRAE DLAQNLSYGH QRRLEIIRAL
ATKPSVLLLD EPAAGLNPQE KLALAQSIRQ IRDRFEVAIL LIEHDMQLVM DICERIVVLD
HGVTICEGTP QTVQNDEKVI AAYLGAIADD A