Gene Plim_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2277 
Symbol 
ID9138982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2940537 
End bp2941808 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID 
ProductGTP cyclohydrolase II 
Protein accessionYP_003630302 
Protein GI296122524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAG GTCAGCCAAT CGAAGGACTG AGCACCATTG ATGAAGCCAT TGCGGCTCTC 
AAAATCGGTC GCATCATTAT TGTGATCGAT GACGAAGAGC GGGAAAACGA GGGCGATTTC
GTTTGTGCTG CCGAATCGAT CACACCAGAA ATGGTCACCT TCATGCTCAG GTACGGAGCC
GGTGTTCTGT GTGTTCCCTT AACGAAAGAA GCTGCCGATC GACAAGGTCT GGTTCCGATT
GTGGACAGCT CACAGAACGA TGCTCCGAAC CACACTTTGT TTCTGACGCC CGTCGACCAT
CGTCACGCAG GGTCTGGTGT TTCCAGTGAG AACCGGGCCA TGACGATCAG GGCGATGGCT
GACCCGAAAT CCTCCCGGCA CGACTTTGTC AGGCCTGGTC ATATTAATCC TCTGCTGGCC
AAGGAGGGTG GCGTTCTAAG GCGTTCAGGA CACACCGAAG CGACTGTCGA TCTGATGAAG
ATTGCCGGGC TTGAGCCTGT GGGTGTGCTG ATCGAAATCC TCAGCGAATC TGGTCAGGGC
ATGGCCGCAC TGCCAGAATT AAGGCAACTC GCTACCAGAC ACTCCATGCC AATCATTTCG
ATTGAGCAGC TCATCCGCTA TCGCCGGTTG CGGGAGCAAC TGGTTTCCAG AGAAGCGGAA
GTCCCTCTGA ACACCCGGGA GTACGGTCAA TTCAAAGTGA TTGCTTATCG TGTCGAACAC
GATGATCAGC AGCCACTCGC TCTCGTATGG GGAGACCTGG CATCGGCCAC AAACCCGCTG
GTGCGCGTCC ACTCCTCCTG CTTTACAGGT GACGTTCTGG ACTCTCTTCG CTGCGATTGC
GGCGACCAGC TTCATCTGGC CATGAGAATG ATCAACAGCG CCGGTGCCGG CGCTGTGATT
TATCTGCCGC AGGAAGGGCG TGGAATTGGT CTGACGGCGA AACTGAAAGC CTATATGCTT
CAAGATGAAG GCTATGACAC TGTTGAAGCC AATCACAAAC TCGGCTTCAA ATCCGACAGT
CGGGATTACA TGATCGGCCT GCAGATTCTT AAAGATCTGG GGTTATCGAG CATCCGATTA
CTGACAAACA ATCCCAAGAA AATGCAGGCC TTTCCCGCCT TCGATCTCGA TGTGGTTGAG
CAGGTTCCCA TCATCGCCCC GGACGATGAA AATCGTCGCC ATTACATGGC AACCAAACGA
GACAAAATGG GGCATCTGTT ACCTGCCGAA ATTGTGGTGC CGTCCTCGCC CAATGAGAAC
TCACCCCATT GA
 
Protein sequence
MDTGQPIEGL STIDEAIAAL KIGRIIIVID DEERENEGDF VCAAESITPE MVTFMLRYGA 
GVLCVPLTKE AADRQGLVPI VDSSQNDAPN HTLFLTPVDH RHAGSGVSSE NRAMTIRAMA
DPKSSRHDFV RPGHINPLLA KEGGVLRRSG HTEATVDLMK IAGLEPVGVL IEILSESGQG
MAALPELRQL ATRHSMPIIS IEQLIRYRRL REQLVSREAE VPLNTREYGQ FKVIAYRVEH
DDQQPLALVW GDLASATNPL VRVHSSCFTG DVLDSLRCDC GDQLHLAMRM INSAGAGAVI
YLPQEGRGIG LTAKLKAYML QDEGYDTVEA NHKLGFKSDS RDYMIGLQIL KDLGLSSIRL
LTNNPKKMQA FPAFDLDVVE QVPIIAPDDE NRRHYMATKR DKMGHLLPAE IVVPSSPNEN
SPH