| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2229 |
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| Symbol | |
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| ID | 9138934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2870901 |
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| End bp | 2872790 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003630254 |
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| Protein GI | 296122476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00541672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGCAC AGAATTACAA GCATTTGGGC GCTCATCCGG AAATTCGTGA TGGGGTTTTA
GGGACTCATT TTGCTGTTTG GGCACCGAAT GCCCGCGAAG TCAGCGTGAT CGCTGATCTG
AATTTCTGGA GTCATGGGCA GAACTGGTTG CAATCCAGTG ATGATGGCGT GTGGCGGGGC
TTTATTCCCG GGATCAAGCC CGGAGATATT TACAAATACA GCCTGAAGAC GGCCTCCGGC
TTGAGACTCG AAAAGTCTGA TCCCTATGCC TTTGCAGCCG AGTTACCACC ACGGACTGCA
TCTGTCGTTT CCGATCTTTC GGGCTTTCGT TGGAATGACG AAAAGTGGAT TCGTCAGCGG
GAAATGAAGA ATATTTATGA GCAGCCCATC TCGGTTTACG AGATCCATCT GGGATCGTGG
CGGAGGCCAA CGGATGGGCG ACGGTATTTC AATTATCGTG AACTGGCCGT GCAACTCGTC
GAATACGTCA AGCCATTGGG TTTTACCCAT CTGCAGTTGC TGCCAGTGAC GGAGCATCCT
TTTGATGGCT CATGGGGCTA TCAGACCACG GGTTATTTTG CGCCGACCAG TCGATTTGGA
ACGCCTCACG ACTTCATGTT CTTCGTCGAT TACTGTCATG AGCACGGCAT TGGTGTACTC
ATGGACTGGG TCCCCGCTCA TTTTCCGACC GATGCACACT CGCTCGGAAA TTTTGACGGG
ACCGCCCTTT ATGAACATGC TGACCCCCGC AAAGGATTTC ATCCCGACTG GGGCACTCTG
ATTTTCAATT ATGGTCGCAC GGAAGTGGCT GATTTTCTGC TCTCCAGTGC CCGATTCTGG
ATGGACGTCT ACCATGTGGA TGGCCTGCGG GTCGATGCCG TGGCCTCTAT GCTGTATCTC
GATTACTCGC GAAAAGCCGG AGAGTGGATG CCGAACATGT TCGGCGGGCG TGAGAATCTG
GAAGCCATTC AGTTTTTGAA AGATTTGAAC GTTGTTATCC ACCAGGATTT TCCTGGCGTC
CTGATGGTGG CTGAAGAGTC GACGTCGTGG GGTGGTGTTT CCCGCCCTGT TTATACAGGG
GGGTTAGGTT TCGGCTTCAA ATGGGATATG GGCTGGATGA ACGATACTTT GCGGTATTTC
CGCAGAGATC CCATTTATCG CCGGCATCAT CAGAACGAAC TCTCATTCCG GATGGTGTAT
GCCTTTACTG AGAACTTCAT GCTGCCACTC TCACATGATG AAGTGGTGCA CGGCAAACGC
TCGTTAATCA GTCAGATGCC CGGAGATCAT TGGCAGCAGT TTGCCAATCT GAGAGTTCTT
TATGGCTATC AGTTCACCAC ACCAGGCAAG AAACTGCTCT TCATGGGTGG TGAAATCGCC
CAGTGGACCG AATGGAATCA TGATGCTCAA CTCGATTGGG AACTGACCAA ATTCCAGTTT
CATCACGGCA TCCAGAAACT TATTGCGGAT TTGAATCAGC TCTATCGATC CGAATCGGCA
TTACATTATG GCGATTGCGA TGCAGAGGGC TTCTCATGGA TCAGCGCTGA TGATTATCAG
AACAGCGTTT ATTCCTGGGT GCGCTACGGC AGTCATCCCG AGAATCTGCT GGTTGTCATG
ATGAATCTCA CACCCATTCC CCGGCACAAC TACAAAGTGG GTGTCCCGTT AGCTGGCTTC
TACAAGGAAG TCCTCAACAC AGACTCCAGT AACTACGGGG GTTCGAATGT AGGGAACTCG
GGTGGTGTCT ACAGCGAAAT CGGACAACTT CATGGGCATG GCCAGTTTAT TCAGGTGACA
TTGCCACCAT TAGGCATGAT TGTGCTGAAA CCCATCACTC GGCCAGCGGC TGTACTCGAA
GCCACGGCAG GAAAAGTGGC GGCAGATTGA
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| Protein sequence | MYAQNYKHLG AHPEIRDGVL GTHFAVWAPN AREVSVIADL NFWSHGQNWL QSSDDGVWRG
FIPGIKPGDI YKYSLKTASG LRLEKSDPYA FAAELPPRTA SVVSDLSGFR WNDEKWIRQR
EMKNIYEQPI SVYEIHLGSW RRPTDGRRYF NYRELAVQLV EYVKPLGFTH LQLLPVTEHP
FDGSWGYQTT GYFAPTSRFG TPHDFMFFVD YCHEHGIGVL MDWVPAHFPT DAHSLGNFDG
TALYEHADPR KGFHPDWGTL IFNYGRTEVA DFLLSSARFW MDVYHVDGLR VDAVASMLYL
DYSRKAGEWM PNMFGGRENL EAIQFLKDLN VVIHQDFPGV LMVAEESTSW GGVSRPVYTG
GLGFGFKWDM GWMNDTLRYF RRDPIYRRHH QNELSFRMVY AFTENFMLPL SHDEVVHGKR
SLISQMPGDH WQQFANLRVL YGYQFTTPGK KLLFMGGEIA QWTEWNHDAQ LDWELTKFQF
HHGIQKLIAD LNQLYRSESA LHYGDCDAEG FSWISADDYQ NSVYSWVRYG SHPENLLVVM
MNLTPIPRHN YKVGVPLAGF YKEVLNTDSS NYGGSNVGNS GGVYSEIGQL HGHGQFIQVT
LPPLGMIVLK PITRPAAVLE ATAGKVAAD
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