| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2159 |
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| Symbol | |
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| ID | 9138863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2782238 |
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| End bp | 2783254 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_003630184 |
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| Protein GI | 296122406 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0023667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGA CCAGTTCGCC GACCGTTGTT GTCCATGCCG GTAAGTCGTT CTGGAAAAGC
TGGGCTTTCC GTGGCATGGC GATCATTCTG GGGTTTTCCG TACTCCTCAA CATGGGCCTG
TATGCCACCT TTCGCGACTA TTTTGCCCGC AGTCCGGAAG TCAGCGAGCG ATTCCTTTCG
GGAAACTCTT CCACAACGCA GCGGATTGCG GTATTGCGAG TCAGTGGCAC GATCATGCCA
CCACTCACCG AACGCATCAT TCGACAGATT GAAGTCGCTG CCGAAGATGA ACGCGTGAAA
GGGGTGCTCC TGACGATTGA CAGCCCAGGT GGGTTTGTTG CTGACAGCCA CCAGATTTAC
CACGCCCTCG AAAAACTCCG CGCGAAGAAG CCGATCAGTA TTCAAATGAA GCGACTGGCA
GCATCCGGCG GATACTACAT CGCGATGGGT GCTGGCACCA AAGGGCAGAT CTTTGCTGAA
CCAACGACCT GGACGGGTTC GATTGGTGTC ATCATTCCCC GGTATGATAT GAGCGAACTG
GTGGAGAAGA TTGGTGTCAG TTCGGATCCG CTGAAGACCG GGGAATTCAA AGACGCACTC
AGTCCGTTTC ATCCGCTGAC AGAAGCTGAG CGAAAAGTCT GGGAAGAAAT TCTCAATCAG
TCTTTTGAAC AATTCATCGA GCTGATTGAC ACCAACCGCG ATACTCTCGA CCGGGAACAG
GCTCGAAAAC TCGCCACCGG TCAGATTTAT ACGGCACGCG ACGCGCGAGC CAACGGGATG
ATTGATGAAA TTGGATTCGA AGAAGATGCC CTGGCGGCCC TGCAGAAATC GTTAAAGCTG
GATCAAGTCC GCGTCGTCGA ATATCGCTCA CAGCCGCAGC TTGTCGATCT ATTACTCGGA
AGCAGAACCG AGAATGTCAC AGCCGCTCAA TGGCAAGCTC TGGTCGACGC CACAACACCG
AGAGCCATGT TCCTTTTCAG TTGGCTGCCA GGTTTGCCTC AATCTCCAGC TCTTTAA
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| Protein sequence | MSTTSSPTVV VHAGKSFWKS WAFRGMAIIL GFSVLLNMGL YATFRDYFAR SPEVSERFLS
GNSSTTQRIA VLRVSGTIMP PLTERIIRQI EVAAEDERVK GVLLTIDSPG GFVADSHQIY
HALEKLRAKK PISIQMKRLA ASGGYYIAMG AGTKGQIFAE PTTWTGSIGV IIPRYDMSEL
VEKIGVSSDP LKTGEFKDAL SPFHPLTEAE RKVWEEILNQ SFEQFIELID TNRDTLDREQ
ARKLATGQIY TARDARANGM IDEIGFEEDA LAALQKSLKL DQVRVVEYRS QPQLVDLLLG
SRTENVTAAQ WQALVDATTP RAMFLFSWLP GLPQSPAL
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