Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2103 |
Symbol | |
ID | 9138806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2727092 |
End bp | 2728138 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Bile acid:sodium symporter |
Protein accession | YP_003630129 |
Protein GI | 296122351 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCGA AAATCGACTG GTTTCTGCTC GGAATGCTGC TGGCTATCGG GCTGGCGTGG CTTTATCCAG CGCCTGGGGC ACGGGGTGGC TGGCTCCATC CGGAACTGAT CACAAGTTTG GGTGTCGCTT TAGTCTTTTA TCTGAATGGT CTTTCCCTGA GCTTTGCTTC GTTGCGACAG GGAATCATGA AATGGAAAGT GCATGTGGTT GTTCAAGGGG CGGTGTTTCT GCTGTTTCCT CTGATCGGGT TGGGGTTGAT ATCAGTCACC AGGGGCTGGC TGCCTGAGGA TTTGCGGCTG GGTTTGTTCT ACCTGTGTGC CTCGCCATCA ACGGTTTCTT CATCTGTGGC TCTGACGGCA GCAGCAGGTG GAAACGTACC TGCAGCAATC TTCAACGCCA CCACTTCCAG TCTGCTGGGC GTCGTGCTGA CTCCCTTATG GATGGCAACC GTTTTGCAGG CCGGTCATTC GAATTCCACT GCGGGAAGTT TTTCCATGCA GGAAGTGATA TGGGAGCTTT TACTTTGGCT GGTTTTGCCA CTGGTTCTGG GGCAGCTTTG CCGGCCATGG CTGGGCGGAT GGGTGACCAG GCATCGCCGA TTTGTCAGCT CGGTCGATCG CGGCACGATT CTTCTGCTGA TCTACACTTC GTTCTGTGAT TCGATGGTCC TGGGCATCTG GACGAAGCAT GGGTTGATGG TCGTCGCTAT CACGGCTGCA ATCACTCTCG CGCTCTTCTA TCTCGTATTT TTCATTCTCA GTGCAGTCTG CCAGGGGTTG ATGTTCAATC GAGAAGACTG GATTGCGACT GTTTTTTGTG GCTCGAAGAA ATCGATGGCC ACGGCTGTCC CTATGGCACA GATCATGTTC GGTACCAGCC CTGCTCTGGG AATGATTCTC CTGCCGATTA TGATTTACCA TCCGCTCCAA CTGGTAATCT GTGGTCTCCT CGCCACTCGC TGGAAGAAGT TGGCTCTCGA TTCCACCTTG AAATCCGAGG GGCAAATCAA TCCCTCTGCG GCTCAGTCAT TTGATAATCA AAATTGA
|
Protein sequence | MKPKIDWFLL GMLLAIGLAW LYPAPGARGG WLHPELITSL GVALVFYLNG LSLSFASLRQ GIMKWKVHVV VQGAVFLLFP LIGLGLISVT RGWLPEDLRL GLFYLCASPS TVSSSVALTA AAGGNVPAAI FNATTSSLLG VVLTPLWMAT VLQAGHSNST AGSFSMQEVI WELLLWLVLP LVLGQLCRPW LGGWVTRHRR FVSSVDRGTI LLLIYTSFCD SMVLGIWTKH GLMVVAITAA ITLALFYLVF FILSAVCQGL MFNREDWIAT VFCGSKKSMA TAVPMAQIMF GTSPALGMIL LPIMIYHPLQ LVICGLLATR WKKLALDSTL KSEGQINPSA AQSFDNQN
|
| |