| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2060 |
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| Symbol | |
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| ID | 9138763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2671433 |
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| End bp | 2673004 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003630087 |
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| Protein GI | 296122309 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00724012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGCT TTGTGCGAAC GTGTCTGAGT CTCTGCCTGG TGGCAGGTCT GGCCACGTTT
GCCTCCGCCG CGAATCCGAT CGTAACGGCC AAGAACCGTT TTCGAATCCC GTTTAAGGTC
GATCCTGCGG CTCTTCAGAG GATGAATGCG CAGGAACTGA GGCTGTATGT TTCATCAGAT
CGGGGGGCGA CCTGGAGTCT GGCCCAATCG ATTAATCCGG AAATTGGCAA GTTCGAGTAT
CAGTCTCCCG GAGACGGCGA ATTCTGGTTC TCTGTCAAAA CTCTGGATGG TGATAACCAG
CTTCAGCCCA ATGGCCGCGT GTTTGAGCCC GGCTTGATGG TCATCGTCGA TACGCGTGAA
CCTCGTGTCG ATCTCGCACT ACAGGAAGTC CAGCAGGGCA AGGTACAGCT TTCGTGGCAT
CTCCACGACC AGAACCTTGA TCCTTCCACA CTCAAGCTGG AATACTCTCA ACCGGGTGTT
GCCGGTTGGC AAACAGTGAG TGTCTCTCCA CGCTCTGCCG GTCAAACAAC CTGGTCAGTC
CCGCAGGGAG GAATTGTTGC CGTTCGTGGC TCAGTTCTCG ATCAAGCCGG TAATCTTGGC
CGAGGAACGA TTCAATCGAC AGTTCGAGGC GGCGACGGTG CTGGAAAAGC AGCCATGCCT
GACACTCGAC AACCGATTGC CAGCATGAAT CGCGATATCT CCACGGAGAC CGCCAATAAC
TCGATGACGG GAGCATTATC GACAGGTCCA ATGATCCAGC CATCCACTGG CATGGTGGGT
CGGCCAGTCT CCAGTGATGT GCAATCTCGT CCAGAAATCG TGAAGAATCC CTACACGACT
GGGGCCGAAA ACTTTGATGA ACCTCCGGTT CAACCGACAG TCACACCGCA GCCAACTAAT
GCCAAAGTGG CTGGGATGGG TGCTGGAGAC CCACTCTTCA AAGGCCGCAT TGTTGCCACT
CGCAAGTTTC AGCTGGCTTA CAAGATCGAC GACCTTGGGC CCTCGGGGAT GAGTGCTGTT
GAACTCTTTA TCACACAGAA CAATGGCCAG CAGTGGTACC GCTATGGTGA AGATGCCGAC
TTGAAGAGCC CGTTCGATGT TCAGGTTCCA CAAGATGGCA TCTATGGCTT TGAGATTCGA
GTTCACAGTG GGGCGGGTTT ATCGGCCGAG CCTCCACGAA ATGGTGAAGC CCCTTCGATT
CAAGTCAAAG TCGATCAGAC AGCCCCCACA TTAGAGCTGC TGGCTGTTGA ACAAGGGCAG
GGGATGCAAC AAAACCTTGT GACAATCCGC TGGCGAGTCC AGGATGCCAA CCTTTCGGAA
ACACCCATTT CGCTCTATGG TGCCGCATCA CCGGCTGGCC CGTGGAATTT GATCAGCGAC
TGGCGACCAG ATACAGGGAG CTTTCGCTGG GAACTTCCTC CCAATGGGCC GTCACAGGTC
TTTGTCCGAG TGGTCGCCCG CGATGCGGCA GGGAACTTTG CCAAGGCCGA ATCGACTCAA
CCCGTAGTGA TTGACCTTAA GCGTCCGTCG GCACGCATCG TGGATGTGGC TCCCGGCATG
CCCCGAGATT AA
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| Protein sequence | MGSFVRTCLS LCLVAGLATF ASAANPIVTA KNRFRIPFKV DPAALQRMNA QELRLYVSSD
RGATWSLAQS INPEIGKFEY QSPGDGEFWF SVKTLDGDNQ LQPNGRVFEP GLMVIVDTRE
PRVDLALQEV QQGKVQLSWH LHDQNLDPST LKLEYSQPGV AGWQTVSVSP RSAGQTTWSV
PQGGIVAVRG SVLDQAGNLG RGTIQSTVRG GDGAGKAAMP DTRQPIASMN RDISTETANN
SMTGALSTGP MIQPSTGMVG RPVSSDVQSR PEIVKNPYTT GAENFDEPPV QPTVTPQPTN
AKVAGMGAGD PLFKGRIVAT RKFQLAYKID DLGPSGMSAV ELFITQNNGQ QWYRYGEDAD
LKSPFDVQVP QDGIYGFEIR VHSGAGLSAE PPRNGEAPSI QVKVDQTAPT LELLAVEQGQ
GMQQNLVTIR WRVQDANLSE TPISLYGAAS PAGPWNLISD WRPDTGSFRW ELPPNGPSQV
FVRVVARDAA GNFAKAESTQ PVVIDLKRPS ARIVDVAPGM PRD
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