Gene Plim_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2059 
Symbol 
ID9138762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2670421 
End bp2671071 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_003630086 
Protein GI296122308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0566877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCC ATTCCAGCGT GACGAGAGTT CTCGAATCCG GGTTAATTGC GATTTTGCGA 
TCAGATTCAC CCGATAAGCT CATTTCGCTG TGCCATGGAC TGCACCGTGG TGGAATTCAA 
ATCATTGAAA TCACCATGAC CGTTCCCGGA GCGCTCGATG TCATTCGCCA GCTTCATCAG 
GAGTTGGGCT CACAGGTGCT CGTGGGAGCT GGCACCATTC TCGACCCGGA AACAGCACGA 
CTGGCAATCC TCGCCGGTGC AGAGTTTCTG GTGACCCCCG CACTGAATGT CGAAACCATC 
CAGTTGGCCA ATCGATATGA CAAGTTGATT CTCCCCGGGA TTTTAACCCC CACAGAATTG 
GTCACAGCAC TGGAAGCCGG AGCGTCCATG GTCAAGCTTT TCCCGGCTGA TGCCGTCGGG 
CCAACCTTTC TCTCAGCACT CACCAGACCA TTTCCGCAGG CGATGATTGT GCCGACAGGT 
GGGGTCACTC TCGACTCTCT CCAGGCATTT GTGAATGCAG GTGCTGCTGC CGTAGGCCTG 
GCCACCAGCC TGATCGATCA GAAACTTGCA CAGAGTGGCG ATGCCACGGA AGCCGAGCGG 
AGGGCTCGCG CTTTTGTGGC AAAATATGCT GAAGTCCGCC GTAAATCCTG A
 
Protein sequence
MSRHSSVTRV LESGLIAILR SDSPDKLISL CHGLHRGGIQ IIEITMTVPG ALDVIRQLHQ 
ELGSQVLVGA GTILDPETAR LAILAGAEFL VTPALNVETI QLANRYDKLI LPGILTPTEL 
VTALEAGASM VKLFPADAVG PTFLSALTRP FPQAMIVPTG GVTLDSLQAF VNAGAAAVGL 
ATSLIDQKLA QSGDATEAER RARAFVAKYA EVRRKS