Gene Plim_2046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2046 
Symbol 
ID9138749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2655723 
End bp2658338 
Gene Length2616 bp 
Protein Length871 aa 
Translation table11 
GC content54% 
IMG OID 
ProductATP-dependent chaperone ClpB 
Protein accessionYP_003630073 
Protein GI296122295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTCC GAGCCGACAA ACTGACTGTT AAAGCCCAGG AGGCACTGCA GGAAGCTCAG 
CAGCTTGCAG AAAACAACGG GCAACCTCAG GTGCAGCCTT TGCATCTGAT CAAAGCCTTG
TTGGACGAGT CGAGCGGCGT TGTACGCCCG ATTCTCGAAA AAATCGGCGT CCGGCTGACT
CAACTCACCA GCCTGGTTGA TAGCGAAATT TCGCGTTTAC CGAAGGTTTC CGGGAGTTCA
TCTCAGGTGG GCGCGTCGAG TGCGCTCATG GATGTCCTGA ACAAAAGCCA GCAGTTGGCT
GACCAGATGA AGGATCAGTT CGTTTCAACC GAACATCTGC TGTTGGCGCT GATCAAGAGT
GACGACGTCG CTGGTCGATT GCTGAAAATG AATGGAGTTG AGGAATCCGA TGTTCTCAAG
GCCCTGCAGT CAATTCGCGG GCATCAGCAA GTGACTGATC AGAATCCGGA AGATAAATAT
CAGGCCCTCG AAAAGTATGG CAAAGACCTT GTCGCACTGG CTCGATTGGG GAAGATCGAC
CCCGTGATTG GCCGCGACAG CGAGATTCGT CGTGTGATTC AAGTCCTTTC ACGCCGCCGC
AAGAACAACC CCGTGCTGAT TGGTGATGCC GGTGTCGGCA AGACGGCGAT TGTCGAAGGC
CTGGCTCATC GCATTGTGCT GGAAGATGTA CCTCAAAACC TCAAAAACAA GCGTGTCATC
GCTCTCGATA TGGGAGCTTT GATTGCCGGT GCCAAATATC GCGGCGAGTT CGAGGATCGA
CTGAAGGCTG TGCTGAAGGA AGTGACCGAA TCCGAAGGGA AAGTCATTCT CTTTATCGAT
GAGCTTCATA CGGTTGTGGG TGCCGGTGCA TCGGAAGGGG CTGTGGACGC TTCAAACCTG
TTGAAGCCAG CCCTTGCCCG GGGTGAACTC CATTGCGTCG GAGCGACCAC GCTCGACGAA
TACCGCAAAT ATATCGAGAA AGATCCTGCT CTCGAACGAC GCTTCCAGCC AGTGCTGGTC
AATGAACCCA GTGTGGAGGA TACGATCTCG ATTTTGCGCG GGCTTAAGGA ACGATATGAG
TCACATCACG GGGTCCGAAT TACCGACGAT GCGATTATCA GCGCTGCCAA ACTGTCGGAT
CGTTACATCG CGGATCGCTT TCTGCCTGAT AAGGCCATCG ACCTGATCGA TGAGGCTGCC
AGCCGGTTGC GCATGGAAAT GGATTCGATG CCAGCCGAAA TCGACGAAGC CACACGAGCA
TTAACACGCC TGCAGATCGA GGCCACAGCT CTGACAAGAG AAACTTCTCC AGACAGTCAG
CAGCGTCTGG CTTCGATCCG AAAGGAGATT GCCGAGAAAG AAGAATCGGT GACGGCTCTC
AAAGCGCGCT GGCAGACCGA GAAAGAAGCA CTTTCCGGCA TTCGCCCCAT GAAGGAAAAA
ATCGAGAAAT TGCGAACGGC TTATGAACAG GCTTTTGCTC AGGCCCAGCG GACCAACAAT
AACGAAGACT TCGTGCGTGC TTTCCAGACG GAGCAGGAAT TGAAAGCCGC ACAGGCCGCG
TTGCAGGCAG CCGAATCGCG AGTAGCCACT TTGGATAACA CCCAGCGGCT GCTGCGCGAA
GAAGTGACTG ATGAGGATAT CGCCAGAGTG GTCAGCCATT GGACGGGGAT TCCCGTAGCC
CGCATGATGC AGACTGAAAA GGCGAAGCTG CTCTCCATGG AAGATCAGAT TCATAAGCGG
ATGATCAACC AGGAAGAGGC TGTCACAGCG GTTTCGAATG CCGTCCGCCG CGCTCGTTCG
GGTATGCAGG ACCCCAATCG ACCGATTGGC TCCTTCATGT TTCTGGGGCC GACCGGTGTG
GGCAAGACGG AACTTTGCAA GGCCTTGGCC GAGTTTCTGT TTGATGATGA AAAGGCGATG
GTGCGTATCG ATATGAGCGA GTTCATGGAA AAGCACTCCG TGGCTCGTCT TATTGGCGCA
CCACCCGGTT ATGTGGGCTA CGAAGAAGGC GGCAAGCTGA CAGAGGCTGT TCGCCGCAGG
CCCTACAGCG TGCTGTTGCT TGATGAAGTC GAGAAAGCCC ATCGCGATGT CTTCAACGTC
TTGCTGCAGG TTCTCGATGA TGGCCGTTTG ACGGATGGTC AGGGTCGAAC TGTGGACTTC
ACGAACACGA TTATCGTCAT GACGTCGAAT ATTGGCAGTC AACTCATTAT GGATCTTTCG
GGAACTGATG ATGAAGGGGA AATCCACAGC CGAGTGATGG GAGCACTGCG AAAAGAGTTC
TTGCCCGAGT TTCTCAACCG CGTGGATGAA GTGATAGTTT TCCATCCCCT CGGAAGAAAG
GAAATTCGGC AGATTGTCGA TCTGCAGCTT GCCAAACTCA TCAAGCGGCT GGCCGAACAC
GATATTCGCC TCGAAGTCAG CGACAGCGTG AAGGATGTTC TCGCGACCGA AGGTTACGAT
CCCACCTATG GGGCCCGGCC TCTCAAACGA GTCATTCAGC AAAGGCTGCA GAACGAACTA
GCCAACTCGT TACTTTCCGG CGAATTCAGT GAATCGAATG TCGTAAGAGT CGATGCTCAT
CACGGCGAGT TTACTTTCAC GGCCTCCAGA GAATAA
 
Protein sequence
MAFRADKLTV KAQEALQEAQ QLAENNGQPQ VQPLHLIKAL LDESSGVVRP ILEKIGVRLT 
QLTSLVDSEI SRLPKVSGSS SQVGASSALM DVLNKSQQLA DQMKDQFVST EHLLLALIKS
DDVAGRLLKM NGVEESDVLK ALQSIRGHQQ VTDQNPEDKY QALEKYGKDL VALARLGKID
PVIGRDSEIR RVIQVLSRRR KNNPVLIGDA GVGKTAIVEG LAHRIVLEDV PQNLKNKRVI
ALDMGALIAG AKYRGEFEDR LKAVLKEVTE SEGKVILFID ELHTVVGAGA SEGAVDASNL
LKPALARGEL HCVGATTLDE YRKYIEKDPA LERRFQPVLV NEPSVEDTIS ILRGLKERYE
SHHGVRITDD AIISAAKLSD RYIADRFLPD KAIDLIDEAA SRLRMEMDSM PAEIDEATRA
LTRLQIEATA LTRETSPDSQ QRLASIRKEI AEKEESVTAL KARWQTEKEA LSGIRPMKEK
IEKLRTAYEQ AFAQAQRTNN NEDFVRAFQT EQELKAAQAA LQAAESRVAT LDNTQRLLRE
EVTDEDIARV VSHWTGIPVA RMMQTEKAKL LSMEDQIHKR MINQEEAVTA VSNAVRRARS
GMQDPNRPIG SFMFLGPTGV GKTELCKALA EFLFDDEKAM VRIDMSEFME KHSVARLIGA
PPGYVGYEEG GKLTEAVRRR PYSVLLLDEV EKAHRDVFNV LLQVLDDGRL TDGQGRTVDF
TNTIIVMTSN IGSQLIMDLS GTDDEGEIHS RVMGALRKEF LPEFLNRVDE VIVFHPLGRK
EIRQIVDLQL AKLIKRLAEH DIRLEVSDSV KDVLATEGYD PTYGARPLKR VIQQRLQNEL
ANSLLSGEFS ESNVVRVDAH HGEFTFTASR E