Gene Plim_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2023 
Symbol 
ID9138726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2623728 
End bp2624612 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630050 
Protein GI296122272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGACGTT GTCGCAGTAA AGTCTTCATC GTGCCCACAC CTGCCGATCG CATCCATCTG 
GCCCTCGAAA TCCTTGTCGA AGAGTGGACC CCATTCATTC GACAGGAATT GAGCAAGTCG
TATGGACATC GAGTCGAAGA AGTCATTCTT GCGCAGATTC GCGGTGATCG AAACATGGCC
TCTGCCAGAT TTTCCGATCC GCTGTCAGAT CCCCATATCT TGCTGAATGT GGTCTGGGAA
CAGTGGAATC ACTGCTTTCG CCATCAGTTG GGAATCTTTG AACGGAGCCT GATCAGCGAA
CTGCGTGAGT TTCGTAATCA GTTAGCTCAT CAGTCGTTTC TCACTGAAGA CGATGCCTAC
CGAGTGCTCG ATAGCGTTCA GCGGTTATTG GTGGCGACAG GCCACACCCA GCGGGCGACT
CAGTTAGAAG ATGAAAAGGT CGATGCACTC CGGCAGAAAT TCGGGCATCG CGTCAATCGC
GAACTGGCCA GAATTCGGTT CAATCGACGG CGTCTGCTCG ACATCGCACT CTACAGTCTC
TGCTGCTTTG CATTGGTCAC AACGTTGTGG AGCTTTCTGT GGGAGCGTCA CTGGCTGGCC
ACATTACTGC TGATTGCCTT CGTGATCTTT ACCTTTGGTT ACTTCATCTA TCAGCGTCTG
AGTGCTGCAA TTCCGGTCTT TGGCGTCCAT GAATGTGCTC ATTGCCGCAG GGTCATCTAC
ACAGAATCTT GCCCGTACTG TGAACAATCG CCTGCACATC GGCATAGACG AGCTCAAATT
CTCGATCCTC GGGAAGAGGC TGATGCGACG CTCGCTCACG AGACACTGGA AATGATTGAC
CAGAGTGCAA ATCCTCTGGA ACTGATTTCC AAAGTTCCGC GCTGA
 
Protein sequence
MRRCRSKVFI VPTPADRIHL ALEILVEEWT PFIRQELSKS YGHRVEEVIL AQIRGDRNMA 
SARFSDPLSD PHILLNVVWE QWNHCFRHQL GIFERSLISE LREFRNQLAH QSFLTEDDAY
RVLDSVQRLL VATGHTQRAT QLEDEKVDAL RQKFGHRVNR ELARIRFNRR RLLDIALYSL
CCFALVTTLW SFLWERHWLA TLLLIAFVIF TFGYFIYQRL SAAIPVFGVH ECAHCRRVIY
TESCPYCEQS PAHRHRRAQI LDPREEADAT LAHETLEMID QSANPLELIS KVPR