Gene Plim_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1994 
Symbol 
ID9138696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2588863 
End bp2589651 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content53% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003630023 
Protein GI296122245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCG AGAATTCTCC ACCAGATTCA CCGCTTGTCA TTCATGATAT GACGGTGGCT 
TACGGCCGAA AGCCTGTCCT CTGGAATATT GACTATGTCT CACCCAGTCG AAAACTGATC
GCGATTGTTG GCCCCAATGG GGCTGGCAAA AGTACCCTAT TGAAGGCGGC TTTGGGTTTG
ATCCCCCGGC AGAATGGAGA GGCTCTGTTT TTTGGCCAGC CTTATCAGGC AGTACGACAA
AAAGTGGCCT ATGTTCCGCA GCGATCCAGT GTGGACTGGG ATTTCCCGAT CAGTGCCCTC
GAAGTGGCGG CCATGGGCTG TTACGGACGT ATGGGGTGGT TTCGCCCAGT GAATCGCGAT
GCCAAAAATA CGGCTTTGGC AGCTCTCGAA CAGGTAGGTC TGGGAGATGT GGCCAGACGT
CAGATTGGTC AACTTTCTGG AGGCCAGCAG CAGCGGGTGT TTCTTGCCAG AGCTCTGGCT
CAGGATGCCG ATCTTTATCT GATGGATGAG CCGTTTGCTG CCGTCGATGC CACGACAGAG
CAATCGATTG TGTCCATGTT GCAGGCATTG AGAGATCGAG GCAAGACGAC GATTGTCGTG
CATCACGATC TGCAGACGGT CTCGGAATAC TTTGACGAAG TGCTGTTGTT AAACTTGCGG
CTGATTGCAG CGGGAGCGGT TTCTGAAGTG TTGACACCTC AAAATCTGAA GGCCACATAC
GGTGGTCAGC TTTCGATTCT GGATGCAGTG GGCCAGCGGA TGTCAGCGAG ACAATCCGTG
ACAAGTTAG
 
Protein sequence
MNAENSPPDS PLVIHDMTVA YGRKPVLWNI DYVSPSRKLI AIVGPNGAGK STLLKAALGL 
IPRQNGEALF FGQPYQAVRQ KVAYVPQRSS VDWDFPISAL EVAAMGCYGR MGWFRPVNRD
AKNTALAALE QVGLGDVARR QIGQLSGGQQ QRVFLARALA QDADLYLMDE PFAAVDATTE
QSIVSMLQAL RDRGKTTIVV HHDLQTVSEY FDEVLLLNLR LIAAGAVSEV LTPQNLKATY
GGQLSILDAV GQRMSARQSV TS