Gene Plim_1942 details

Gene Information

• Locus tag: Plim_1942
• ID: 9138644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2529015
• End bp: 2529749
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 56%
• Product: exsB protein
• Protein accession: YP_003629971
• Protein GI: 296122193

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.243954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTGG ATCATCAGAA AGCAAGTACT GCTCCTCCAC AAAAAAAAAT ATCGCCACCC 
TGTGTGGTGC TGGTGAGTGG TGGGCTGGAT TCCGCCACAA TTCTTGCCAT GGCCAAAGCG 
CAGGGGTTTT CTCCCTTTGC GATCTCATTT GATTACGGCC AGCGGCACCG CTTTGAATTG 
GAAGCCGCTG AGAAAGTCTG CCAGGCGCAG GGCGTCGCCC GGCATGTCGT CATTCCCCTC 
GACATGCGAT CGATCGGGGG CTCAGCCCTC ACCGCCAATA TCGATGTCCC CAAGGACCGC 
TCGGAAGCCG AATTGACCAG CGGCATTCCC ATCACCTACG TTCCCGCCCG AAACACGGTC 
TTCCTCTCGA TTGCCTTAGG CTGGGCCGAA GTGATCGGGG CACAGGATTT GTTTGTAGGT 
GTGAACGCCG TGGATTACAG CGGCTACCCC GATTGCCGAC CGGAATTTGT AGCCGCTTTT 
GAGAAGCTGG CGAACCTCGC CACCCAAACC GGCGTCGAAG GCCAGCCCTG GAAAATCCAT 
GCACCATTAA TTCACCTCAC GAAGGCTGAA ATCATCCGGC AGGGAGTCGC CCTGGGTGTC 
GATTACTCTT TAACTCATAG CTGCTATGAT CCAACTCCCA CAGGACTTTC CTGCGGCCAC 
TGTGACTCCT GTCTGATTCG CAAGAAGGGG TTCCTCGAAG CACATATTCC AGATCCCACC 
CGTTATGCCG ACTGA 

 

Protein sequence

MALDHQKAST APPQKKISPP CVVLVSGGLD SATILAMAKA QGFSPFAISF DYGQRHRFEL 
EAAEKVCQAQ GVARHVVIPL DMRSIGGSAL TANIDVPKDR SEAELTSGIP ITYVPARNTV 
FLSIALGWAE VIGAQDLFVG VNAVDYSGYP DCRPEFVAAF EKLANLATQT GVEGQPWKIH 
APLIHLTKAE IIRQGVALGV DYSLTHSCYD PTPTGLSCGH CDSCLIRKKG FLEAHIPDPT 
RYAD