Gene Plim_1926 details

Gene Information

• Locus tag: Plim_1926
• ID: 9138628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2514811
• End bp: 2515443
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 61%
• Product: hypothetical protein
• Protein accession: YP_003629955
• Protein GI: 296122177

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000124495
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGGTA TGTTCAAGTC TATGGCGGCT GCTGCCGTCG CTGTTGTCCT GTGTTGTGCA 
AGCGCTGCCG ACGCCGGTCT GTTCCGTCGT TCAAGCGATT GCTGTGCTCC AGCTCCTAGC 
TGCGCCGCAC CTGCACCAAG CTGTGCAGCT CCTGTTGCCT GTGCACCTAG CTGCGCTGCT 
CCAGTTGCTT GTGCTCCTGC TTGCGAACCA ACCCCTTGCT GCAAAGTGAA GAAGGTTCGT 
TGCAAGAAGA AGCGTTCCAG CTGCTGCCCA AGCGAATGTG CACCAAGCTG TGCAGCTCCT 
AGCTGCGCCG CTCCAGTCGC CTGTGCTCCT ACATGTGCCG CTCCTGCTCC AGCTGCTTGT 
GCACCAGCAC CAGTCGCTTG TGCTCCAGCT GCTCCAACAT GTGCTGCACC AGCTCCTGCC 
GCCTGTGCAC CAGCTCCATG TGCTCCAACA TGTGCAGCTC CTGCTGTTGC ATGTGCACCT 
GCCGCTGCTC CATGTGCTCC AGTAGCACCA TGTGCCCCAG TGGCTCCATG TGCTCCAACA 
TGTGCTGCAC CAGCAGCACC TGTCGAAGCT GCTCCAGCCG CCCCTGTTGC TCCAGCTCCT 
CCAGCCGAAG CACCAGCACC AGCTGCTAAC TAA 

 

Protein sequence

MAGMFKSMAA AAVAVVLCCA SAADAGLFRR SSDCCAPAPS CAAPAPSCAA PVACAPSCAA 
PVACAPACEP TPCCKVKKVR CKKKRSSCCP SECAPSCAAP SCAAPVACAP TCAAPAPAAC 
APAPVACAPA APTCAAPAPA ACAPAPCAPT CAAPAVACAP AAAPCAPVAP CAPVAPCAPT 
CAAPAAPVEA APAAPVAPAP PAEAPAPAAN