Gene Plim_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1871 
Symbol 
ID9138573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2442616 
End bp2444364 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content59% 
IMG OID 
Productpotassium-transporting ATPase, A subunit 
Protein accessionYP_003629900 
Protein GI296122122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCA ACGGACTTGT GCAACTGGCA ATCTATCTCG GAGTTCTTCT GGCCTGCGTG 
AAGCCCCTGG GCTTTTACAT GGCCAGGGTA TATTCCGGGT CGGCAACCTT TCTTGACCGC
TTCATCGGAC CACTGGAACG ACTGCTGTAT CGACTCTGCG GCATCGACAA ATCCGCCGAG
ATGACTTGGC GCCAGTATTC AGTGGCAGCG ATGTCCTTCA GTCTGGTGAG CTTCCTTGCG
GTCTACGCTT TTCAGCGAAC GCAAGGTTGG CTGCCGCTCA ACCCTGAATC GCTGCCTGCC
GTCTCGCCTG ATTCATCGTT TAATACGGCG GTGAGCTTCA CGACGAACAC GAACTGGCAG
GGATACGGCG GCGAGACCAC GATGAGCTAC CTCACGCAGA TGCTGGCCCT CACCGTGCAG
AATTTCGTTT CGGCGGCAGC TGGCATGGCC GTGCTGGTCG CTCTGATTCG GGGCTTTACC
CGGCACACAA CGGAAACTAT CGGCAACTTC TGGGTCGATC TCGTGCGTGG AACGCTCTAC
ATCCTGCTAC CGCTGTCGCT GTTTTTGGCC GTCGCACTCG TTTCGCAGGG AGTCGTGCAG
ACTTTCAACT CGTATCACGA AGTCGCGTTT CTTGAACCGA CCGTTGATGC CGAAGGTCAT
GCCGTCACCA CACAGAGCAT CGCTGTCGGT CCAGCCGCTT CGCAAATTGC GATCAAACAG
CTTGGCACTA ATGGCGGCGG ATTCTTCAAC GTGAATTCGG CCCACCCGTT GGAGAACCCC
ACGCCGCTCT CAAACTTCCT TCAATTGTTA GCTATTCTGC TGATTCCTGC CGCCCTGTGC
TACACGTTCG GCGAGATGAT TGGCGACCGC CGCCAGGGTT GGGCAGTACT GGCGGCGATG
CTGGTGATCT TCGTTCCGCT GCTGGCGGCC ACGACGATCA CTGAACAGTC GGGAAACCCG
ATCCTCGCCC GCCTGGGGGC CGACCAGTCG GCATCCGATT CACAGCCGGG TGGAAACATG
GAGGGAAAAG AATCCCGCTT TGGAATTGTG AACTCGTCGC TGTGGGCGGT GGCAACGACT
GCTGCTTCGA ACGGTTCCGT GAACTCGATG CATGACTCCT TCACGCCCCT GGGAGGTCTT
GTACCGATGT GGCTGATGCA GTTGGGCGAA GTGATCTTCG GTGGCGTCGG CTCCGGCCTC
TACGGCTTAT TGATGTTCGC CATTGTCGCT GTTTTCCTCT CCGGCCTGAT GGTCGGACGC
ACGCCGGAAT ATCTCGGCAA GAAGATTGGC GCCTTCGAAA TGAAAATGGC TGCTCTGGCA
ATCCTGTTTC CCTGTGCGAT GGTGCTTGTG GGAACGGCGG TGTCCGTCGT CTCGGCGTCT
GGTCGAGCGA CGATCTTCAA CCCTGGTCCA CATGGTTTCA GCGAAGTGCT GTACGCCTTC
TCGTCAGCAG GGAACAACAA CGGCAGTGCC TTTGCGGGAC TGGGAGCGAA CACGCCGTTC
TACAACGGCC TTCTGGGCCT GGCGATGCTC GTCGGGCGGT TCTGGGTGAT GCTGCCGGTC
CTGGCGATTG CCGGTTCGCT GGCGGCGAAG AAGACCGTGC CTGCTGGGCC GGGAACTTTA
CCAACACACA CGCCGCTGTT TGTTGTCCTG CTGGTGGCCG TGGTGATCGT GGTGGGAGCC
TTGAGCTTCT TCCCAGCCCT GGCTCTAGGG CCAATTGTCG AGCACCTGCT AACGGCGAAC
CAGGAGTAA
 
Protein sequence
MTSNGLVQLA IYLGVLLACV KPLGFYMARV YSGSATFLDR FIGPLERLLY RLCGIDKSAE 
MTWRQYSVAA MSFSLVSFLA VYAFQRTQGW LPLNPESLPA VSPDSSFNTA VSFTTNTNWQ
GYGGETTMSY LTQMLALTVQ NFVSAAAGMA VLVALIRGFT RHTTETIGNF WVDLVRGTLY
ILLPLSLFLA VALVSQGVVQ TFNSYHEVAF LEPTVDAEGH AVTTQSIAVG PAASQIAIKQ
LGTNGGGFFN VNSAHPLENP TPLSNFLQLL AILLIPAALC YTFGEMIGDR RQGWAVLAAM
LVIFVPLLAA TTITEQSGNP ILARLGADQS ASDSQPGGNM EGKESRFGIV NSSLWAVATT
AASNGSVNSM HDSFTPLGGL VPMWLMQLGE VIFGGVGSGL YGLLMFAIVA VFLSGLMVGR
TPEYLGKKIG AFEMKMAALA ILFPCAMVLV GTAVSVVSAS GRATIFNPGP HGFSEVLYAF
SSAGNNNGSA FAGLGANTPF YNGLLGLAML VGRFWVMLPV LAIAGSLAAK KTVPAGPGTL
PTHTPLFVVL LVAVVIVVGA LSFFPALALG PIVEHLLTAN QE