Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1871 |
Symbol | |
ID | 9138573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2442616 |
End bp | 2444364 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | potassium-transporting ATPase, A subunit |
Protein accession | YP_003629900 |
Protein GI | 296122122 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACATCCA ACGGACTTGT GCAACTGGCA ATCTATCTCG GAGTTCTTCT GGCCTGCGTG AAGCCCCTGG GCTTTTACAT GGCCAGGGTA TATTCCGGGT CGGCAACCTT TCTTGACCGC TTCATCGGAC CACTGGAACG ACTGCTGTAT CGACTCTGCG GCATCGACAA ATCCGCCGAG ATGACTTGGC GCCAGTATTC AGTGGCAGCG ATGTCCTTCA GTCTGGTGAG CTTCCTTGCG GTCTACGCTT TTCAGCGAAC GCAAGGTTGG CTGCCGCTCA ACCCTGAATC GCTGCCTGCC GTCTCGCCTG ATTCATCGTT TAATACGGCG GTGAGCTTCA CGACGAACAC GAACTGGCAG GGATACGGCG GCGAGACCAC GATGAGCTAC CTCACGCAGA TGCTGGCCCT CACCGTGCAG AATTTCGTTT CGGCGGCAGC TGGCATGGCC GTGCTGGTCG CTCTGATTCG GGGCTTTACC CGGCACACAA CGGAAACTAT CGGCAACTTC TGGGTCGATC TCGTGCGTGG AACGCTCTAC ATCCTGCTAC CGCTGTCGCT GTTTTTGGCC GTCGCACTCG TTTCGCAGGG AGTCGTGCAG ACTTTCAACT CGTATCACGA AGTCGCGTTT CTTGAACCGA CCGTTGATGC CGAAGGTCAT GCCGTCACCA CACAGAGCAT CGCTGTCGGT CCAGCCGCTT CGCAAATTGC GATCAAACAG CTTGGCACTA ATGGCGGCGG ATTCTTCAAC GTGAATTCGG CCCACCCGTT GGAGAACCCC ACGCCGCTCT CAAACTTCCT TCAATTGTTA GCTATTCTGC TGATTCCTGC CGCCCTGTGC TACACGTTCG GCGAGATGAT TGGCGACCGC CGCCAGGGTT GGGCAGTACT GGCGGCGATG CTGGTGATCT TCGTTCCGCT GCTGGCGGCC ACGACGATCA CTGAACAGTC GGGAAACCCG ATCCTCGCCC GCCTGGGGGC CGACCAGTCG GCATCCGATT CACAGCCGGG TGGAAACATG GAGGGAAAAG AATCCCGCTT TGGAATTGTG AACTCGTCGC TGTGGGCGGT GGCAACGACT GCTGCTTCGA ACGGTTCCGT GAACTCGATG CATGACTCCT TCACGCCCCT GGGAGGTCTT GTACCGATGT GGCTGATGCA GTTGGGCGAA GTGATCTTCG GTGGCGTCGG CTCCGGCCTC TACGGCTTAT TGATGTTCGC CATTGTCGCT GTTTTCCTCT CCGGCCTGAT GGTCGGACGC ACGCCGGAAT ATCTCGGCAA GAAGATTGGC GCCTTCGAAA TGAAAATGGC TGCTCTGGCA ATCCTGTTTC CCTGTGCGAT GGTGCTTGTG GGAACGGCGG TGTCCGTCGT CTCGGCGTCT GGTCGAGCGA CGATCTTCAA CCCTGGTCCA CATGGTTTCA GCGAAGTGCT GTACGCCTTC TCGTCAGCAG GGAACAACAA CGGCAGTGCC TTTGCGGGAC TGGGAGCGAA CACGCCGTTC TACAACGGCC TTCTGGGCCT GGCGATGCTC GTCGGGCGGT TCTGGGTGAT GCTGCCGGTC CTGGCGATTG CCGGTTCGCT GGCGGCGAAG AAGACCGTGC CTGCTGGGCC GGGAACTTTA CCAACACACA CGCCGCTGTT TGTTGTCCTG CTGGTGGCCG TGGTGATCGT GGTGGGAGCC TTGAGCTTCT TCCCAGCCCT GGCTCTAGGG CCAATTGTCG AGCACCTGCT AACGGCGAAC CAGGAGTAA
|
Protein sequence | MTSNGLVQLA IYLGVLLACV KPLGFYMARV YSGSATFLDR FIGPLERLLY RLCGIDKSAE MTWRQYSVAA MSFSLVSFLA VYAFQRTQGW LPLNPESLPA VSPDSSFNTA VSFTTNTNWQ GYGGETTMSY LTQMLALTVQ NFVSAAAGMA VLVALIRGFT RHTTETIGNF WVDLVRGTLY ILLPLSLFLA VALVSQGVVQ TFNSYHEVAF LEPTVDAEGH AVTTQSIAVG PAASQIAIKQ LGTNGGGFFN VNSAHPLENP TPLSNFLQLL AILLIPAALC YTFGEMIGDR RQGWAVLAAM LVIFVPLLAA TTITEQSGNP ILARLGADQS ASDSQPGGNM EGKESRFGIV NSSLWAVATT AASNGSVNSM HDSFTPLGGL VPMWLMQLGE VIFGGVGSGL YGLLMFAIVA VFLSGLMVGR TPEYLGKKIG AFEMKMAALA ILFPCAMVLV GTAVSVVSAS GRATIFNPGP HGFSEVLYAF SSAGNNNGSA FAGLGANTPF YNGLLGLAML VGRFWVMLPV LAIAGSLAAK KTVPAGPGTL PTHTPLFVVL LVAVVIVVGA LSFFPALALG PIVEHLLTAN QE
|
| |