Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1786 |
Symbol | |
ID | 9138487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2314722 |
End bp | 2316380 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)) |
Protein accession | YP_003629815 |
Protein GI | 296122037 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCATT CCTTCCCATT TCGGGTAATC AGTGATCCCG CCTTCAATAA AGGAACTGCG TTCAGTATCG AGGAGCGAGA TCGCTACGGG CTGCATGGCC TGCTCCCTCC GCATATCGAA AGTCTCGACG AACAGGTTCA GCGGGTGTAC GAGGCCTACC AGCGGAAAGA CGATGATCTC GAACGGCATA TTTACCTTCG GGCACTGCAG GATACGAACG AGGTGCTATT TTACAGGCTG CTGCTGGAGC ATATTGAAGA GATGCTCCCA ATGGTCTACA CGCCTGTAGT CGGGCAGGCC TGTCAGCTTT TCAGCCATAT CTATCGCCGG CCGAGAGGAT TGTTCATTTC TTATCCGATG CGAGACTCGA TTGGCTCGCT CCTCCGCAGC AGGCCGTACC CTGATGTGGA TGTCATTGTG GTGACGGATG GAGAACGAAT TCTCGGGATT GGCGATCAAG GGGCTGGCGG GTTGGGGATT CCGATTGGAA AACTTTCGCT TTACACGCTG ATTGGCGGGA TTCGCCCTGA GCGGACATTA CCCATCGTGC TCGATGTCGG CACTAATAAT GCCGAGCGTC TCAAAGATCC CGAGTACGTT GGCTGGCGAC ATGAACGCAT TTCGGGGCAG GCGTATTTCG ATTTCATTGA TCAGTTTGTC AAAGCTGTTC AACAGGAGTT GCCTCAGGTT TGCCTGCAAT GGGAAGACTT TGCGACCCCG CATGCCAGAC CCATTCTTGA GCGTTATGCC AACAAGTTGC TGACGTTCAA TGACGATATC CAGGGAACAG CCGCTGTCGC TCTGGGGGCT GTGATGGGGG CTGTGGGCGT CACGGGAAAA CCATTGCGGG AACAGCAGAT CGTGTTTCTC GGTGCAGGTT CGGCAGCAGT GGGTGTGGAC GATTATCTGA GGGCGGCTTT AGTGCAGGAC AGATTATCGG AAGTCGAGGC CCGGCAGCGG TTCTGGATGG TCGATAAAGA CGGGCTGTTG CACTCCGATC GGCATGACCT TTCACCCGAA CAACAGGTTT ATGTCCAGGA CTCCGCAAAG TTGGCCAATT GGCCAAAAAC AGCCCATGGA GCCATCGGTC TGGCGGATGT GATTCAGCAG GTCAACGCCA CGATTCTCAT TGGTCTCTCC ACCGTGGGGG GGGCGTTTAC TGAACCGATC ATTCGCGAAA TGGCGGGCAA AGTCGATCGT CCTGTGATTC TACCACTCTC GAACCCCACA TCGCGTTCTG AGGCTTGCCC GGAAGATTTG CTCCGCTGGA CGAATGGCCG GGCTTTGGTG GCAACGGGTT CACCCTATGC TCCAGTTGTG TGGGAAGGGC GGACAATACC CATTGCCCAG TGCAATAATG TCTTCATTTT CCCCGCGGTG GGGCTGGGAG TTGTGGCTTC CAAAGCCACG CGAGTGACCG ACGGCATGAT GCTCGCTGCA GCGCGGGCAC TGGGCGAGCA TTCCCCTGCT CTGAAAGATC CTGCAGGCTC GCTCCTCCCG CCGCTTTCTG AAGTACGATC TGTCGCCCGT GCCATTGCCG AAGCCGTCGG AATGGAAGCA CAACGGGCTG GTGTGACCCC CTTAACAACT CGAACTGAGC TCGCGGCCAG AGTCCAGGCC AGTCAATGGC TGCCAGAATA TGGGCCTGTC GCTGACTGA
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Protein sequence | MGHSFPFRVI SDPAFNKGTA FSIEERDRYG LHGLLPPHIE SLDEQVQRVY EAYQRKDDDL ERHIYLRALQ DTNEVLFYRL LLEHIEEMLP MVYTPVVGQA CQLFSHIYRR PRGLFISYPM RDSIGSLLRS RPYPDVDVIV VTDGERILGI GDQGAGGLGI PIGKLSLYTL IGGIRPERTL PIVLDVGTNN AERLKDPEYV GWRHERISGQ AYFDFIDQFV KAVQQELPQV CLQWEDFATP HARPILERYA NKLLTFNDDI QGTAAVALGA VMGAVGVTGK PLREQQIVFL GAGSAAVGVD DYLRAALVQD RLSEVEARQR FWMVDKDGLL HSDRHDLSPE QQVYVQDSAK LANWPKTAHG AIGLADVIQQ VNATILIGLS TVGGAFTEPI IREMAGKVDR PVILPLSNPT SRSEACPEDL LRWTNGRALV ATGSPYAPVV WEGRTIPIAQ CNNVFIFPAV GLGVVASKAT RVTDGMMLAA ARALGEHSPA LKDPAGSLLP PLSEVRSVAR AIAEAVGMEA QRAGVTPLTT RTELAARVQA SQWLPEYGPV AD
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