Gene Plim_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1784 
Symbol 
ID9138485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2312430 
End bp2313269 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content55% 
IMG OID 
ProductEthanolamine ammonia-lyase 
Protein accessionYP_003629813 
Protein GI296122035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.209842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCAC CAGAAACTCA GCCCGACGCC TGGTCCTCCT GGCAGGAACT GACTTCTGCA 
CGAATTGCTC TTGGTCGTGC TGGAGGGAGT CTGCCGACGC GTGAGTGGCT TAAGTTCAGC
CTCGCACACG CCCGCGCTCG TGATGCTGTT CATATCGAAC TCGATAGCCA ACGGCTCAGT
GACGAAATGC AGTCTCTGGG CTGGGAAACA ATCGTTGTGG CCTCGCAGGC CCATGATCGC
ACCGAAATGC TGCAAAGGCC AGATCGAGGT CGAAAACTCC GTCCTGATGA TGCGATTCGA
CTCCAACAAT TGGCCAGCAC AGCAACCCCA GGTCCCTCAG ATGGATATAC CTTTGACCTG
GCGATTCTCG TGGCGGATGG ACTTTCCGCA GTGGCAGCAC AAGCTCATGC AGTCGGACTC
TTAAAAAATC TGTTGCCACC ATTCCATGAT CGCGGCTGGA GAATTTCACC GATTGTGATT
GCTCATCAGG GACGAGTGGC CCTGCAGGAT GAGGTAGGTT CTTGCCTGAA TGCCCGGCTC
ATTCTCTCTC TGATCGGAGA ACGCCCGGGG TTAGGATCGC CGGATAGCCT GGGGGCCTAC
TTCGTTTATG AGCCCCGCCC GGGAAGAAAC GATGCCCAGC GGAATTGCGT TTCTAATATC
CGACCAGACG GACTACCGCT CCCCGCCGCT GCCGACACGT TGATTTACCT GTTAACAGCT
TCGCATACCC GCCACCTGAG TGGCGTTGAC CTTAAAGATG ACCGGGTTCT GCTGGAAGAA
AACACTAATC CAATGAAGTC GATGGATAGT CCTTCAGAAA AAGACGGCAG CCACTCATGA
 
Protein sequence
MVSPETQPDA WSSWQELTSA RIALGRAGGS LPTREWLKFS LAHARARDAV HIELDSQRLS 
DEMQSLGWET IVVASQAHDR TEMLQRPDRG RKLRPDDAIR LQQLASTATP GPSDGYTFDL
AILVADGLSA VAAQAHAVGL LKNLLPPFHD RGWRISPIVI AHQGRVALQD EVGSCLNARL
ILSLIGERPG LGSPDSLGAY FVYEPRPGRN DAQRNCVSNI RPDGLPLPAA ADTLIYLLTA
SHTRHLSGVD LKDDRVLLEE NTNPMKSMDS PSEKDGSHS