Gene Plim_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1684 
Symbol 
ID9138385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2183390 
End bp2183839 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629713 
Protein GI296121935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.43716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATTG CCGATGAACT CTTCAAACTG CAGCAGCTTC GCGATAACGG TACGATCTCG 
AATGAAGAAT TCGAGCTTCA AAAAGCCCGG CTGATTGAAC CCAAGCCAGC ACTCAATCTG
GATGTGAAGC AATGGTCTGT GCTACTCCAC CTCTCACAAT TGTTGAATCT GGTGACGGGC
TTTGGCGGAA TTATTGCCCC CATTGTCATC TGGATGCTCT TCCGCGATCA ATCACCAGAG
ATTGACCAGC ACGGAAAGAA CATCGTGAAC TGGTGGATTT CCAGCTTCAT CTACGGAGTT
GTCAGCGGCA TTCTCTGTGT CGTGATCATT GGCATCCCGA TGTTGATTGT GCTGGTGATC
CTGACGATCC TCTTCCCCAT CATCGGTGCC ATTAAGGCCG GTAATGGAGA GGTCTGGAAA
TATCCAATGA CCATCGCCTT TATCAAGTAG
 
Protein sequence
MSIADELFKL QQLRDNGTIS NEEFELQKAR LIEPKPALNL DVKQWSVLLH LSQLLNLVTG 
FGGIIAPIVI WMLFRDQSPE IDQHGKNIVN WWISSFIYGV VSGILCVVII GIPMLIVLVI
LTILFPIIGA IKAGNGEVWK YPMTIAFIK